Lemur catta (Ring-tailed lemur): 123648835
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Entry
123648835 CDS
T08326
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03013
Nucleocytoplasmic transport
lcat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123648835 (UPF3A)
03015 mRNA surveillance pathway
123648835 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcat03019
]
123648835 (UPF3A)
Messenger RNA biogenesis [BR:
lcat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123648835 (UPF3A)
mRNA cycle factors
P-body specific factors
123648835 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
123648835
NCBI-ProteinID:
XP_045422677
LinkDB
All DBs
Position
13:83657734..83678947
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AA seq
466 aa
AA seq
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MRSQEGVGGPGTAVAARGPSGREKLPALEGQLRHESPRQEPETPPASSSGKHREEKTTAL
SKVVVRRLPPGLTQEQLEEQLRPLPAHDYFEFFAADLSLHPHLYSRAYINFRNPDDILPF
RDRFDGYIFIDSKGLEYPAVVEFAPFQKVARKKLKRRDAKTGSIEDDPEYKKFLETYCVE
EEKASANPETLLGEIEAKTRELVARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKK
RLREEEKRKRREEERCKRKEADKQKTTEKEIRIKLLKKPEKGEEPTTGKPSERGEDVDCG
AGSRKACAVVRARPLQSWLEELGAKSQNDGDREHRDTERRSREKEPEAQRCHADARKHRA
HCEPGRLPRRTDAELRSGRGSAPDGGKKGGQDGGPGEAEARTGRGQRCEDSPAPRKEPRG
NKVFINPEGKSVPVACRGLHLWCEGELLLRGSVFTRAGIPGSQIPK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcggtctcaggagggggttggaggcccggggacggctgttgctgctcggggcccgagc
gggagggaaaagctgccggctctagagggccagctccgccatgagtcgccgcggcaagag
cctgagaccccaccagcctcatcttcgggcaaacatcgcgaggagaagacgacggccctg
agcaaggtggtcgtccggcgactgccccccggcctcacccaggagcagctggaggagcag
ctgcgcccgctgcccgcgcacgactacttcgagttcttcgcggccgacctcagtcttcat
cctcatctctactcaagagcatacattaattttagaaaccctgatgacatccttcctttt
agagatcgttttgatggatatatcttcattgacagtaaaggcctagagtatcctgcagtg
gtggagttcgccccgttccagaaagtagccaggaagaagctgaagagaagagatgccaag
accggaagcatcgaagatgatccagagtataagaagttcttggaaacttactgtgtggag
gaagagaaggccagtgccaaccctgaaacgctgctgggagagatagaggcaaagacacga
gaacttgttgctagaagaaccacacctcttttggaatatattaaaaacagaaaattagaa
aagcagagaattcgagaagagaagcgagaagagcggaggaggagggagttagagaagaaa
cgcttgcgggaagaagaaaaaagaaaaagaagagaagaagaaagatgtaaaaggaaagag
gcagataaacagaagactactgagaaagaaataaggattaagcttcttaagaaaccggaa
aagggagaggagccaaccacagggaaacccagcgaaagaggagaggacgttgactgtgga
gcgggaagccggaaagcgtgtgcagtggtgagagccaggcccctgcagagctggctggag
gagctcggggcgaagtcgcaaaatgacggtgacagagagcacagggacacggagagacga
tctcgggaaaaagaacctgaagcgcagaggtgccacgcggatgccagaaagcacagagcg
cactgcgagccaggcaggcttcccaggaggaccgatgctgagctgagatcggggagaggg
tctgccccggacggagggaagaagggcggccaggacggcggccccggggaggccgaagcg
cggacgggaagagggcagaggtgtgaggacagcccggcaccccgcaaggagccgcgggga
aataaggtctttattaacccggaaggaaaatctgtcccggtggcgtgtcgggggttgcac
ctatggtgtgagggggagctactgcttcgagggtcagtgtttactagagcaggtattcct
ggaagtcagatcccaaagtga
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