Lemur catta (Ring-tailed lemur): 123649007
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Entry
123649007 CDS
T08326
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04390
Hippo signaling pathway
lcat04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
123649007
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
123649007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcat03000
]
123649007
Transcription factors [BR:
lcat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123649007
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GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
123649007
NCBI-ProteinID:
XP_045422920
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Position
13:6243032..6258204
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AA seq
416 aa
AA seq
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MRCDVYNQDFQGPDAEPFMTPMRDAVLQTAPSKYYGMLVSVLSPVVEKSVQTTAQLVVDL
GKTEWLKQKKGVHSAAKKVMEFASLSFSLSNYSFISFSARCPTLPTRPRPPFLPPRAGPP
KSRPRSGHGAEAVGPQQTPGGGGGGNQISPARVKWPRNAFVVWSGGRRRKMAQERPRMRN
SEISKRLSTEWKLLSETEKRPFTDEAERLRALNMKKDKYTLPRGLXGPGGDSVASGVGVG
ADLGAGVNRRRDRCAHTSGCSNGSCRAMQHRRGWRQLLGLDTHGAAQRQPRHRHDVSAGQ
YNSMASSQTCVNGSPTYSMFCLQQGTPGRALGSIGAVVKSEASSXPPVVTASSHSRASCQ
AADLRDEISRNLPGAEVRELPAPSRLHLSQHYRAAASDHSPGCWRLHPCPPARAAS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgtgatgtttacaatcaagacttccaggggcctgatgcagagcccttcatgact
cccatgcgggatgctgttctgcagactgccccctcaaaatactatggcatgctggtttca
gttttgagccctgtggtggaaaagtcagtgcagaccacagcccaactggtggtagactta
ggcaaaactgaatggttgaaacaaaagaagggtgtccacagtgcagccaagaaggtcatg
gaatttgcctctctctctttttctctctccaattattcattcatctcattttccgcgcgc
tgccctacgctcccgacacgcccgcgccccccctttctccccccgcgcgcgggaccccca
aagtccaggccgcgctcgggacacggagccgaagccgtcggcccgcagcaaactccgggg
ggcggcggcggcggcaaccagatcagcccggcccgcgtcaagtggcccaggaacgccttc
gtggtgtggtccggcgggcggcggcgcaagatggcccaggagcgccccaggatgcgtaac
tccgagatcagcaagcgcctgagcaccgagtggaaacttctgtcggagacggagaagcgg
ccgttcacggacgaggccgagcggctgcgagcgctgaacatgaagaaggataagtacacg
ctgccccgcgggctgncgggccccggcggcgacagcgtggcgagcggggtcggggtgggc
gccgacctgggcgcgggcgtgaaccggcgcagggacaggtgcgcgcacacgagcggctgc
agcaatggcagctgccgcgctatgcagcaccggcggggctggcggcagctcttgggcctc
gacacgcacggcgccgcgcagaggcagcccaggcaccggcacgacgtgagcgctgggcag
tacaactccatggccagctcgcagacctgcgtgaacggctcgcccacctacagcatgttc
tgcttgcagcagggcacccctggcagggctcttggctccataggagcggtggtcaagtcc
gaggccagctccnatccccctgtggttaccgcttcctcccactccagggcgtcctgccag
gctgcggacctccgggacgagatcagcaggaacctccctggagccgaggtgcgggaactt
cccgcccccagcagacttcacctgtctcagcactaccgggctgctgctagtgaccactca
ccgggctgctggaggcttcacccttgccctcccgcaagagccgccagctga
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