Lemur catta (Ring-tailed lemur): 123649345
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Entry
123649345 CDS
T08326
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04151
PI3K-Akt signaling pathway
lcat04510
Focal adhesion
lcat04512
ECM-receptor interaction
lcat04820
Cytoskeleton in muscle cells
lcat04926
Relaxin signaling pathway
lcat04933
AGE-RAGE signaling pathway in diabetic complications
lcat04974
Protein digestion and absorption
lcat05146
Amoebiasis
lcat05165
Human papillomavirus infection
lcat05200
Pathways in cancer
lcat05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123649345 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123649345 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123649345 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
123649345 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
123649345 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
123649345 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123649345 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
123649345 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
123649345 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
123649345 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
123649345 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcat04147
]
123649345 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
lcat00536
]
123649345 (COL4A2)
Exosome [BR:
lcat04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
123649345 (COL4A2)
Glycosaminoglycan binding proteins [BR:
lcat00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123649345 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
123649345
NCBI-ProteinID:
XP_045423381
LinkDB
All DBs
Position
13:complement(12738575..12916662)
Genome browser
AA seq
1712 aa
AA seq
DB search
MRRHQRAASGPALQRWLLLGAVTVGVLAQSVLAGVKKFDVPCGGRDCSGGCQCYPEKGGR
GQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGAPGITGPKGDVGARGVSGFPGADGIP
GHPGQGGPRGRPGYDGCNGTTGDAGPQGPYGSDGFPGPPGPQGPKGQKGEPYALSREDRD
RYRGEPGEPGLVGYQGPPGRPGPVGQMGPVGAPGRPGPPGPPGPKGQPGNRGLGFYGEKG
EKGDVGQPGPNGIPSDTIHPIVGPTRITILPDQYKGEKGSEGEPGIKGISLKGEEGIVGF
SGARGSPGFDGEKGAPGQKGSRGLDGFQGPDGPRGPKGEAGDRGAPGLPAYSPHPSLAKG
ARGDPGFQGAYGEPGSRGEPGDPGPPGLPGTSIIDDDEKRGLPGEMGPKGFAGDPGIPAR
YPGPPGADGTPGLRGPPGPAGEPGPDGFLFGLKGTEGRVGYPGPSGFPGARGQKGWKGEA
GDCRCEEGDEFVRGAPGLPGPKGFPGVNGEPGRKGEPGDPGQHGIPGFPGFKGAPGNVGV
PGPKGAKGDSRTITTKGERGQPGIPGVPGIKGDDGLPGREGLDGFPGLPGPPGDGIKGPP
GDQGYPGPPGTKGVSGERGPPGLGLPGPKGERGFPGDAGLPGPSGFPGPPGPPGTPGQID
CDTGVKRPFGEDGQEAVQPGCIGGPKGLPGLPGPPGPTGAKGLRGIPGFPGADGGPGLKG
FPGDPGREGFPGPPGFVGPRGSKGAVGLPGPEGPPGPIGLPGPAGPPGERGLPGEVLGAQ
PGPRGDAGLPGHPGLKGLPGDRGPPGFRGSQGMPGMPGLKGQSGFPGPSGQPGLSGPPGL
HGFPGNPGQEGPLGLPGAPGLGGLPGDRGEPGDTGVPGPVGMKGFSGDRGDAGLSGERGH
PGSPGFKGMVGMPGTPGLKGDRGSPGMDGFQGMPGLKGRPGLPGSKGEAGFFGIPGLKGL
SGEPGVKGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGLKGIQGMPGIPGLS
GIPGLPGRPGYIKGVKGDIGVPGVPGLPGLPGVAGPPGITGFPGFTGSRGDKGAPGSAGL
YGETGPTGDFGDIGDTVDLPGRPGLKGERGSAGTPGLKGFFGEKGTEGSIGFPGIPGAPG
VQGPPGLKGQTGFPGLTGLQGPQGEPGRIGPPGSKGDDGWPGVPGLPGFPGSRGISGLHG
LPGTKGLPGSPGGDIYGDPGFQGPPGDRGDPGEANTLPGPVGAPGQKGEQGAPGERGPAG
SPGLQGFPGITPPSNISGAPGDKGAPGIFGLEGYRGPPGPPGPAALPGGKGDAGNPGAPG
VPGTKGWVGDPGPQGRPGVFGLPGEKGPRGEQGLMGNTGATGTVGDRGPKGPKGDQGFPG
APGPVGSPGIAGVPPRIAVQPGIVGPQGRRGLPGAQGEMGPQGPPGDPGLRGDPGRAGPQ
GRGGVSAVPGFRGDQGPVGHQGPTGQEGEPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQ
EPMCPVGMNRLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASR
NDKSYWLSTTAPLPMMPVAEDEIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPPGWRSLW
IGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIP
EQSFQGSPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atgagaagacaccagagagcagcgtctggccctgccctgcagcggtggctgctgctgggg
gccgtgacagtgggggtcctggcccagagcgtcttggcgggtgtgaagaagtttgatgtg
ccctgtggagggagagactgcagtgggggctgccagtgctaccctgagaaaggcgggcgt
ggtcagcccgggccagtgggcccccagggctacaacgggccaccagggttgcaaggattc
ccaggactgcagggccgcaagggtgacaaaggtgaaagaggagctcctggaataacggga
ccaaaaggagacgtgggagcaagaggcgtttctggattccctggtgctgatggaattccc
ggacatccggggcaaggaggccccagaggaaggcccggctatgacggctgcaacggaacc
acgggtgacgcaggcccacagggaccctacggctctgacgggttccctggccctcccggg
cctcaaggacccaaagggcagaaaggcgaaccctacgcactgtccagagaggaccgcgac
agatacaggggtgaacctggagagcctggattggtcggttaccaggggcctcccggccgc
cctgggcccgtgggacagatgggcccagttggagctccaggaagaccaggaccacccgga
ccccctggaccaaaaggacagccaggcaacagaggacttggtttttatggagaaaaggga
gaaaagggtgacgtgggacagccggggcccaacgggatcccgtcggataccattcatccc
atcgtgggacccaccaggattaccatcctcccggatcagtacaagggcgagaaaggaagt
gagggagaaccaggaataaaaggcatttccctgaagggagaagaaggcatcgtgggcttt
tcaggagccaggggaagccctggcttcgacggtgaaaaaggcgcgccaggacagaaagga
agcagaggcctggatggtttccaaggccctgatgggcccagaggacccaagggagaagcg
ggtgaccgaggagccccaggactgcctgcctactccccgcatccttccctagcaaaaggt
gccagaggtgacccgggattccaaggggcctatggagagcctggaagccggggtgagcca
ggagaccccggccccccaggcctgcctggaacatccatcattgatgacgatgagaagcgg
ggcctgccaggtgagatgggacccaaaggcttcgcaggagacccgggcatccctgcgcgc
tacccaggcccacccggagcagatggaacgccgggcctccgaggaccccccgggcctgcc
ggagaacctggaccagatggtttcctgtttggcctcaaaggaacggaaggaagagtgggc
taccctgggccctccggcttccctggggcccgaggacagaagggatggaaaggtgaggct
ggggactgcagatgcgaagaaggcgatgaattcgtccggggcgctccaggactgccagga
cccaagggcttcccgggtgtcaatggggagcccggcaggaaaggcgagccaggcgacccc
gggcagcacggcatccccgggttcccggggttcaagggagcccctggcaatgttggtgtg
cctgggcccaaaggagcaaagggagattccagaacaatcacaaccaaaggtgagcgggga
caaccaggcatcccaggtgtgcccgggataaaaggagacgatggcctcccagggcgtgag
ggtctcgatggatttcccggcctcccaggtcctccgggcgatggcatcaaaggcccccca
ggggaccagggctacccaggaccacctggaacgaaaggtgtctcaggagagaggggcccc
ccgggcctgggcttaccaggcccaaaaggcgagcgcggtttccctggagacgccggacta
cctggaccctcaggcttcccgggtcctcctggcccccctgggaccccaggacaaatagat
tgtgacaccggtgtgaaaaggccctttggagaggacggacaagaggctgtccagccaggt
tgcatcggagggcccaagggactgccaggcctgccgggacccccaggccccacaggtgcc
aaaggcctccgagggataccaggattcccaggagccgacggagggcccgggctcaagggt
ttcccaggagatccaggtcgcgaagggttcccaggacccccagggttcgtgggaccccga
ggatccaaaggtgcagtgggccttcctggcccagagggacccccaggtcccatcggtctc
ccagggccagccgggccccctggggagagggggcttcctggggaagtcctaggagcccag
cctgggccccggggagatgctggcctgcccggacaccctgggctgaaaggccttcccgga
gacagaggccccccgggattcagaggaagccaggggatgccaggaatgccggggctcaag
ggccagtcgggcttcccgggaccttcaggccagccaggactgtccgggccgccaggacta
cacggattcccaggaaatcctggccaagagggacccttggggctgccaggtgcccccggc
cttggaggtctacctggggaccgaggggagcctggggacacaggcgtccctggcccagtg
ggcatgaaaggtttctctggcgatagaggagatgctggtctgtctggcgagcgaggccat
ccaggaagcccaggattcaaagggatggtcggcatgcccggaacccctgggctgaaagga
gacagaggctcgcctgggatggatggtttccagggcatgcctgggctcaagggaagacct
gggctgccgggaagcaaaggagaggctggattttttggaattcctggcctgaagggtctg
tccggagagccaggtgttaaaggcagccgaggagaccccgggcccccaggaccgcctccc
atcatcctgccaggaatgaaagacattaaaggggagaaaggagatgaagggcccatgggg
ctgaaaggatacctgggcctgaaaggtatccaaggaatgccggggatccccgggctgtcc
ggaatccctgggctacccgggaggcccggctacatcaaaggagtcaaaggtgacatcgga
gtccccggagtgcctggtctgccagggctccctggggtggctggcccccctggaattaca
ggattcccagggttcacgggaagccggggtgacaagggtgccccagggagcgcaggcctg
tacggcgaaaccggccccactggtgacttcggtgacattggggacactgtagatttgcca
gggaggccaggcctgaagggagaacggggcagcgctgggacgccaggtctaaagggattc
tttggagagaagggaacagagggcagcatcggcttccccgggatccctggagcacctgga
gtccaaggccctcctggactgaaaggacaaacaggctttccgggactgacggggctgcag
gggccgcagggagagcccggccggatcggaccgcctggcagcaagggagatgacggctgg
cccggggtgcccggcttaccaggtttcccaggaagccgaggcatcagcggactgcatggc
ttgccaggcaccaagggcttgccgggatccccaggtggtgacatctacggagacccaggt
ttccaaggccctcctggggacagaggtgacccaggagaggccaacaccctcccaggccct
gtgggagccccgggacagaaaggggaacaaggagctccaggggagcgaggcccagcaggg
agtccgggactgcaggggttccctggcatcacgcccccttccaacatctccggggcaccc
ggtgacaaaggggcaccaggcatattcggcctggaaggttatcgaggcccccccgggcca
cccgggcctgcggctcttcctggcggcaaaggcgacgcggggaacccaggagctcccggc
gtcccagggaccaaaggatgggtcggggaccccgggccccagggcaggccgggcgtgttc
ggtctcccgggggagaaagggcccaggggtgagcagggcctcatgggcaacactggagcc
accgggactgtgggtgacagaggccccaagggacccaaaggagaccaaggattccccggt
gcgcccggccctgtgggatccccagggattgcgggagtccccccgaggatcgccgtgcag
cctgggatagtgggtccccaggggaggagaggtcttcctggggcacaaggcgagatgggg
ccccagggcccccccggagacccaggtctccgtggggatccagggagggccgggccccag
ggaagaggcggcgtgtctgctgttccagggttccgcggggaccaagggcctgtggggcac
caggggccaactggccaagaaggtgagccaggccgtccggggagcccgggcctgcccggc
atgccgggccgcagcgtgagcatcggctacctgctggtgaagcacagccagacggaccag
gagcccatgtgccccgtgggcatgaaccggctgtggagcgggtacagcctgctgtacttc
gaaggccaggagaaggcccacaaccaggacctggggctagcaggctcctgcctggcacgg
ttcagcaccatgcccttcctgtactgcaaccccggagacgtctgctactatgccagccgc
aacgacaaatcctactggctctccaccaccgccccactgcccatgatgcctgtggccgag
gatgaaatcaagccctacatcagccgctgctctgtgtgcgaggccccagctgtcgccatt
gctgtccacagtcaagatgtctccatcccccactgcccacctgggtggcgaagtttatgg
attggatattccttcctcatgcacaccgctgccggggatgaaggtggcggccagtcactg
gtgtcgccgggcagctgtctggaggacttccgtgccacgccgttcatcgagtgcaacggg
ggccgtgggacatgccactactatgccaacaagtacagcttctggctgaccaccatcccc
gagcagagcttccagggctcgccctcggccgacacgctcaaggccggcctcatccggacg
cacatcagccgctgccaagtttgtatgaagaacctgtga
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