Lemur catta (Ring-tailed lemur): 123649738
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Entry
123649738 CDS
T08326
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
123649738 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lcat00536
]
123649738 (COL13A1)
Glycosaminoglycan binding proteins [BR:
lcat00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123649738 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
123649738
NCBI-ProteinID:
XP_045423870
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All DBs
Position
14:48016508..48163166
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AA seq
837 aa
AA seq
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MAEERAHKAAAAGARGPGELGAPGTVALAAARAERCARLPSPGSCGLLALALCSLALSLL
AHFRTAELQARVLRLEAERGEQQMETAILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCP
PGPPGPTGRPGLPGEKGAIGMPGRVGVKGQPGEKGAPGDAGLSIIGPRGPPGQPGTRGFP
GFPGPIGLDGKPGHPGPKGEMGLAGPRGQPGPQGQKGEKGQCGEYPHRAWAVGTGRWHLQ
VSISSHMGLVVPSSVLHGVALPGLPAPARQVLVKAIEWALLAGPGFCPATQGAEDMPDSD
LWVPGPGRGHGREGEEGSGVLVSVGSPFTLPVPLHSLPNQEYLSSMPAALRSSQIITLKG
EQGQAGIQGPPGPPGPPGPTGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERG
MPGMPGKHGAKGAPGIAVAGMKGEPGTPGAKGEKGAAGSPGLPGLLGQKGEKGDAGNSIG
GGRGEPGPPGLPGPPGPKGEAGADGQDGPPGWQGDKGEPGAAGERGPAGPKGSKGEPGKG
EMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGPPGIPGQKGEVGLPGPPGHDGEKGP
RGKPGDMGPPGPQGPPGKDGPPGVKGESGHPGSPGEKGEKGDTGQAGSPGLDGPTGEKGE
PGGQGRPGATGLPGPIGLPGFTGEKGEAGEKGDPGAEVPGPPGPEGPPGPPGLQGVPGPK
GEAGLDGAKGEKGVQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAA
GLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggagcgcgcccacaaagcggcagccgccggtgcccgcggccctggggagctg
ggcgcgccggggacggtggcgctggctgcggcgcgggcggagcgctgcgcgcggctgcca
agcccggggtcgtgcgggctgctggcgctggccctgtgctcgctggcgctcagcctgctc
gcccactttcggacggcggagctgcaggcccgggtgctgcgcctggaagcggagcgcggg
gagcagcaaatggagacggctattttgggacgagtcaaccaactgctggacgagaaatgg
aagctccattctcggaggcgccgggaggccccgaagacgtctccaggatgtaactgccca
ccaggacctcctggtcccactggaagacccggactcccaggggaaaaaggtgccattggg
atgcctggacgtgtgggagtgaagggccaaccaggcgagaagggggctcccggagacgct
gggctgtccatcatcggtccccgaggcccccctggtcaaccaggcactcgaggttttcct
ggatttccgggtcccattgggctagacggcaaaccgggccaccccggaccaaagggggag
atgggtctggcaggcccccgaggacagccgggacctcaaggacaaaaaggagaaaagggg
cagtgtggagagtacccgcaccgggcctgggccgtagggacagggagatggcatcttcag
gtgtccatctcctcccacatgggcctcgtggtgcccagcagtgtgctgcatggtgtggcc
ctccccgggctgcccgcccctgccaggcaggtcctggtgaaggccatcgagtgggccttg
ctagcagggcccggcttctgcccagccactcagggggctgaagacatgccagactctgac
ctctgggttcctgggccggggagaggccatgggagggagggggaggaggggagcggggtg
ctggtgtctgtgggctctcccttcaccctccctgtgccactccattccctcccaaaccag
gagtacctaagcagcatgccagcagctctgcgctccagccagataattaccctgaagggt
gaacagggccaggccggcatccaaggtccgccagggccaccaggcccccctggaccgact
ggacctctggggcacccaggactgccagggcccatggggccacccggcttacctgggcct
cctggaccaaagggagacccagggatccagggctaccatggccggaagggagaacggggc
atgccagggatgccgggcaagcatggcgccaagggggctcctggaatcgccgtggccggg
atgaagggtgagccggggaccccaggagccaagggtgaaaagggggctgcgggctccccg
gggctgcctggcctcctggggcagaagggagagaaaggcgatgctggcaactccatcgga
ggcggcagaggggagcccggccccccagggctccctgggcccccaggaccaaagggagaa
gcgggtgctgatggccaggatggccccccaggatggcaaggagacaagggggagcccgga
gcagctggagaacggggaccagctggccccaagggctccaaaggagaaccagggaaaggc
gagatggtggactacaacgggaacatcaacgaggctctccaggagatccgaacgctggcc
ttgatgggccctcctggtcttcctgggcaaatcggcccacccggacctccagggattcca
ggccagaagggtgaggtcggactgccaggccctccaggacacgacggggaaaagggacct
cgaggcaaaccaggagacatgggtccccctggtccccaaggacccccaggaaaggatggc
cctccaggagtgaagggggaaagcgggcacccagggagcccaggagagaagggagagaaa
ggggacacgggacaagcaggctcgccgggtctagacggcccaactggggagaaaggagaa
ccaggtggccaaggcagacccggagcgacaggattgcctggcccaattgggctcccggga
tttacaggagagaaaggagaagccggggagaaaggtgacccgggagcagaggttcctggg
ccaccagggccagaggggcctcctggacccccggggctccaaggcgttcctggaccaaag
ggggaagcagggctggacggagcgaaaggagagaagggcgtccaaggagaaaaaggagac
cgagggcccctgggactacctggtactccaggaccaattggagttccaggcccagcggga
ccaaagggcgagaggggcagcaaaggagaccctgggatgacaggaccaacgggagcagct
gggcttcctggtttacacggaccacccggggacaaaggaaaccggggggagagggggaag
aaaggctctagagggcctaaaggggataagggagaccaaggagcgcctggattagatgcc
ccctgcccattgggcgaagacggcttgccagtccagggctgctggaacaagtga
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