Lemur catta (Ring-tailed lemur): 123650062
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Entry
123650062 CDS
T08326
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123650062 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcat03021
]
123650062 (TAF5)
03036 Chromosome and associated proteins [BR:
lcat03036
]
123650062 (TAF5)
Transcription machinery [BR:
lcat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123650062 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
123650062 (TAF5)
Chromosome and associated proteins [BR:
lcat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123650062 (TAF5)
STAGA complex
123650062 (TAF5)
TFTC complex
123650062 (TAF5)
SAGA complex
123650062 (TAF5)
SLIK complex
123650062 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
VPS8_N
ABM-like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
123650062
NCBI-ProteinID:
XP_045424434
LinkDB
All DBs
Position
14:complement(21473636..21487887)
Genome browser
AA seq
800 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLIPPQAGDGAGEGSGSTTNNGPNGGGGNVAAASLASGD
GGTPKPAVAVSAAAPAGAAPVPAAAPEAGASHDRQTLLAVLQFLRQSNLREAEEALRREA
RLLEEAVAGSGAPGEVDSAGAEAACALLSRVTASVPGPAAPDPPGAGASGATAVSGSVSG
PAAPGKAGSVIVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLF
YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF
RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA
GEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPN
APPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTD
DSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILY
GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF
VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN
CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS
RDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPV
VHLHFTRRNLVLAAGAYSPQ
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctagagcctgagggaccg
ccgacgctgatacctccgcaggcgggggacggcgcgggcgagggtagcggcagcactacc
aacaacggccccaatggtggcggcgggaacgttgcggcggcgtcgttggctagcggggat
ggcgggacccccaagcccgcggtggctgtctccgccgctgccccggcgggggcggccccg
gtgcctgccgctgctccggaggccggcgcttcccacgaccgacagactctgctggccgtg
ctgcagttcctacggcaaagcaacctccgcgaggccgaagaggcgttacgccgtgaggcc
cggctgctggaggaggcagtggcgggctccggagccccgggagaggtggacagcgccgga
gctgaggcggcttgcgcgcttctcagccgggtcacagcctccgtccccggccctgcggcc
cccgaccctccgggcgccggcgcttcgggggctacggccgtctcgggctcagtctcaggt
cctgcggctccggggaaagctggaagtgtaattgtggaagaccagccagatgtcagtgcc
gtgttgtcggcctacaaccaacaaggagatcccacaatgtatgaagaatactacagtgga
ctgaaacacttcattgaatgttccctggactgccatcgggcagagttatctcaactcttt
tatcctctgtttgtacacatgtacttggagctagtctacaatcaacatgaaaatgaagca
aaatcattcttcgagaagttccatggagatcaggaatgttattaccaggatgacctacga
gtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggatttt
cgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagaggcat
cttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacattgac
atctttgatgggatgccgcgtagtaagcagcagatagatgcgatggtgggaagtttggca
ggagaggctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaagaacca
gaaattgaggtacctttggatgatgaggatgaagaaggagaaaatgaagaaggaaaacct
aaaaagaagaagcccaaaaaagacagtattggatccaaaagcaaaaaacaagatcccaat
gctccacctcaaaacagaattcctcttcctgagttaaaagattcagataagttggataaa
ataatgaatatgaaagaaaccaccaaacgagtgcgccttgggccagactgcttaccctcc
atttgtttctatacattcctcaatgcttaccagggtctcacggcagtggatgtcactgat
gattctagtctgattgctggaggttttgcagattcaactgtcagagtgtggtctgtgaca
cccaaaaagcttcggagtgtcaaacaggcatcagatcttagcctcatagacaaagaatca
gatgacgtcttagaaagaatcatggatgagaaaacagcaagtgagttgaagattttgtat
ggtcacagtgggcctgtctatggagccagcttcagtccagataggaactatttgctttcc
tcttcagaggatggaactgtcagattgtggagccttcaaacatttacctgtttggtggga
tataaaggacacaactatccagtatgggacacgcaattttctccatatggatattatttt
gtgtcagggggccacgacagagtagctagactctgggctacagaccactatcagccttta
aggatatttgctggccatcttgctgatgtgaattgtaccagattccatccaaattctaat
tatgttgccacgggctctgcagacagaactgtgcggctctgggatgtcttgaatggtaac
tgtgtaaggatcttcactggacacaagggaccaattcattccttgacattttctcccaat
gggagattcctggctacaggagcaacagatggcagagtactcctttgggatattggacat
ggtctgatggttggagaattaaaaggccacactgatacagtctgttcacttaggtttagt
agagatggtgaaattttggcatcaggttcgatggataatacagttcggttatgggatgct
gtcaaagcatttgaagatttagagactgatgactttactacagccactgggcatataaat
ttacctgagaattcacaggagttattgttgggaacatatatgaccaaatcaacgccagtt
gtacacctccattttacgcgaagaaacctggttctagccgcaggagcttatagtccacaa
taa
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