Lemur catta (Ring-tailed lemur): 123650622
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Entry
123650622 CDS
T08326
Symbol
ABCA5
Name
(RefSeq) cholesterol transporter ABCA5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123650622 (ABCA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcat02000
]
123650622 (ABCA5)
Transporters [BR:
lcat02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
123650622 (ABCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
123650622
NCBI-ProteinID:
XP_045425479
LinkDB
All DBs
Position
15:complement(47730089..47808893)
Genome browser
AA seq
1654 aa
AA seq
DB search
MHSVQADTENMASAIREVGVWRQTRTLLVKNYLIKCRTKKSSAQEILFPLFFLFWLILIS
MMHPNKKYEEVPDIELNPMDKFILSNLILGYTPVTNITSSIMQKVSTEHLADVVITEEYT
NEKEMLASSRSKSSDFVGVVFKDFMSYELRFFPDMIPVSSIYMDSRAGCSKSCEAAQYWS
SGFTVLQASIDAAIIQLKTNVSLWKELESTKAVIMGETAVVEIDTFPRGVILIYLVIAFS
PFGYFLAIHIVAEKEKKLKEFLKIMGLHDTAFWLSWVLLYTSLIFLMSLLMAVIATVSLL
FPQSSSIVIFLLFFLYGLSSVFFALMLTPLFKKSKHVGIVEFFVTVAFGFIGLLIVLMES
FPKSLVWLFTPFCQCTFLIGIAQVMHLEDFNEGALFSNLTEGPYPLIITLTMLVLNSIFY
VLLAVYLDQIIPGEFGLRRSSLYFLKPSYWSKSKRNYTELSEGNVNGNISFNEVVEPVSS
EFVGKEAIRISGIQKTYRKKGENVEALRNLSFDIYEGQITALLGHSGTGKSTLMNILCGL
CPPSDGFASIYGHRVSEIDEMFEARKMIGICPQLDIHFDVLTVEENLSILASIKGIPANN
VIQEVQKVLLDLDMQAIKDNQANKLSGGQKRKLSLGIAVLGNPKVLLLDEPTAGMDPCSR
HIVWNLLKYRKANRVTVFSTHFMDEADILADRKAVISQGMLKCVGSSIFLKSKWGIGYRL
SMYIDKYCATESLSSLVKQHIPGATLLQQNDQQLVYSLPFKDMDKFSGLFSALDRHSNLG
VISYGVSMTTLEDVFLKLEVEAEIDQADYSVFTQQPPDEEMDSKSFDEMEQSLLILSETQ
ASLVSTMSLWKQQMYTIAKFHLLTLKRESKSVRSVLLLLLIFFAVQIFMFLVHHSFKNAV
VPVKLVPDLYFLKPEDKPHKYKTSLLLQNSTDSDISDLISFFTNWNIMVTMFNDSDYVSA
APHSAALNVMQLEKDYVFTAVFNSTMVYSLPVLMNIISNYYLYHLNVTETIQIWSTPFFQ
EITDIVFKIELYFQTALLGIIVTAMPPYFAMENAENHKIKAYTQLKLSGLLPSAYWIGQA
IVDIPLFFVVLILMLGSLFAFHYGLYFYAVKFLAVVFCLIGYVPSVILFTYIASFTFKKI
LNTREFWSFVYSVTALACIAITEITFFMGYTVTTILHYTFCIVIPIYPLLGCLISFVKIS
WKNTRKNEDTYNPWDRDKLLMAVISPYLQCILWIFLLQYYERKYGGRSIRQDPFFRTLST
KSKKRKFLEPPNNEDEDEDVKAERLKVKELISCQCCEEKPSIMVSSLHKEYDDKKDFLLS
RKVKKVATKYISFCVKKGEILGLLGPNGAGKSTIINILVGDIEPTSGQVFLGDYSSEATE
DDDSIKCMGYCPQINPLWPDITLQEHFEIYGAVKGMTASDLKEVVSRITNALDLKEYLQK
TIKKLPAGIKRKLCFALSMLGNPQITLLDEPSTGMDPKAKQHMWRAIRTAFKNKKRAAIL
TTHYMEEAEAVCDRVAIMVSGQLRCIGTVQHLKSKFGKGYFLEIKLKDWIENLEIDRLQR
EIQYIFPNASRQESFSSILAYKIPKEDVQSLSQSFSKLEEAKHTFAIEEYSFSQATLEQV
FVELTKEQEEEDNTCGTLNSTLWWERTQEDRVVF
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgcattctgtacaggctgatacagaaaacatggccagtgcaattagggaggtgggagtt
tggagacagaccagaacactcctagtaaagaattacctcattaaatgcagaactaaaaaa
agtagtgctcaggaaattctttttccattattttttttattttggttaatactaattagc
atgatgcatccaaataagaaatatgaagaagtgcctgatatagaacttaatcctatggac
aaatttatcctctctaacctaattcttggatatactccagtgactaatataacaagcagc
atcatgcagaaagtgtctactgagcaccttgctgatgtcgtaattactgaagaatataca
aatgaaaaagaaatgctagcatccagtcgttctaagtccagcgactttgtaggtgtggtt
ttcaaagacttcatgtcctacgaactccgttttttccctgatatgattccagtatcttct
atttatatggattcaagagctggctgttcaaagtcatgtgaggctgctcagtactggtcc
tcagggttcacagttttacaagcatccatagatgctgccattatacagttgaagaccaat
gtttctctttggaaggagctggagtcaactaaagctgttattatgggagaaactgctgtt
gtagaaatagatacctttccccgaggagtaattttaatatacctagttatagcattttca
ccttttgggtactttttggcaattcatatcgtagcagaaaaagaaaaaaaattaaaagaa
tttttaaagataatgggacttcatgacactgccttttggctttcctgggttcttctgtat
acaagtttgatttttcttatgtcccttcttatggcagtcattgcaacagtttctttgtta
ttccctcagagtagcagcattgtgatatttctactttttttcctgtatggattgtcatct
gtattttttgccttaatgctgacacctcttttcaaaaaatcaaagcatgtgggaatagtt
gaattttttgtcactgtggcttttggatttattggccttttgatagtcctcatggaaagt
ttccccaaatcattagtatggctttttactcctttctgtcaatgtacatttttgattggt
attgcacaggtcatgcatttagaagattttaatgaaggtgctttattttcaaatttgact
gaaggcccatatcctctaattattactcttaccatgctagtacttaatagcatattctat
gttctcttggctgtctatcttgatcaaatcattccaggggaatttggcttacggagatca
tctttatattttctgaagccatcatattggtcaaagagcaaaagaaattatacggagtta
tcagagggcaatgttaatgggaatattagttttaatgaagttgttgagcctgtttcttca
gaatttgtaggaaaagaagccataagaatcagtggtattcagaagacatacagaaagaaa
ggtgaaaatgtggaagctttgagaaatttgtcatttgacatatatgagggtcagattact
gcattacttggccatagtggaacaggaaagagtacattgatgaatattctttgtggacta
tgcccaccttctgatggatttgcatcaatatatggccacagagtttcagaaatagatgaa
atgtttgaagcaagaaaaatgattggcatttgtccacagttagatatacactttgatgtt
ttgacagtagaagaaaatttgtcaattttggcttcaatcaaaggaataccagccaacaat
gtaatacaagaagtgcagaaggttttactagatttagacatgcaggctatcaaagataac
caagctaacaaattaagtggtggtcaaaaaagaaagctgtctttaggaattgctgttctt
gggaatccgaaggtactactgctagatgaaccaacagctggaatggacccctgttctcgc
catattgtttggaatcttttaaaatacagaaaagccaatcgggtgacggtgttcagtact
catttcatggatgaagctgacattcttgctgataggaaagctgtcatatcacaaggaatg
ttgaaatgtgttggttcttcaattttcctcaagagtaaatgggggattggctatcgcctg
agcatgtacatagataaatattgtgccacagaatctctttcttcgctggttaagcaacac
ataccaggagctactttattacaacagaatgaccaacaacttgtatatagtttgcctttc
aaggacatggacaaattttcaggtttgttttctgctctagacaggcattcaaatttgggt
gttatttcttatggtgtatccatgacaactttggaagatgtattcttaaagctagaagtt
gaagcagaaattgaccaagcagattatagtgtatttactcagcagccaccagatgaagaa
atggattcaaaatcttttgatgaaatggagcagagcttacttattctttctgaaacccag
gcttctctagtgagcaccatgagcctttggaaacagcagatgtatacaatagcaaagttt
catttacttactttgaaacgtgaaagtaaatcggtgagatccgtgttgcttctgctttta
attttttttgcagttcagatttttatgtttttggtgcatcactcttttaaaaatgctgtg
gttcctgtcaaacttgttccagacttgtatttcctaaaacctgaagataaacctcataaa
tacaaaacaagtctgcttcttcaaaattctactgactcggatatcagtgatcttattagc
tttttcacaaactggaacattatggtgacaatgtttaatgacagtgactatgtatctgct
gctccccatagtgcagctttaaatgtgatgcaattagaaaaggactatgtttttacagca
gttttcaacagtactatggtctattctttacctgtattgatgaatataattagtaactac
tatctttatcatttaaatgtgactgaaaccatccagatctggagtaccccattctttcaa
gaaattactgacatagtttttaaaattgagctatattttcaaacagctttgcttggaatc
attgttactgcaatgccaccttactttgccatggaaaatgcagagaatcataagatcaaa
gcttatacacaacttaaactttcaggtcttttgccatctgcgtattggattggacaagct
atagttgatatccccttattttttgttgttcttattttgatgttaggaagcttatttgct
tttcattatggattatatttttatgctgtaaagttccttgctgtggttttttgccttatt
ggttatgttccatcagttattctgttcacttatattgcctctttcacctttaagaaaatt
ttaaataccagagaattttggtcatttgtctattctgtgacggcgttggcttgcattgca
atcaccgaaataactttctttatgggatacacagttacaactattctccattataccttt
tgtatagtcattccaatctatccacttctaggttgcctgatttctttcgtaaagatttct
tggaagaatacacgaaaaaatgaggacacctacaatccatgggatagggataagcttttg
atggctgttatatcgccttatctgcagtgcatactgtggattttcctcttacagtactat
gagagaaaatatggaggcagatcaataagacaggatccgtttttcaggactctttcaaca
aagtccaaaaaaaggaaatttctagaaccaccaaacaatgaggatgaagatgaagatgtc
aaagctgaaaggctaaaggtcaaagagctgatcagttgccagtgttgtgaggagaaacca
tccattatggtcagcagtttgcataaagaatatgatgacaagaaagattttcttctttca
agaaaagtaaagaaagtggcaactaaatacatctctttctgtgtgaaaaaaggagagatt
ttgggactattgggtccaaatggtgcaggcaaaagcacaattattaatattctggttggt
gatattgaaccaacttcaggccaggtatttctaggagattattcttcagaggcaactgaa
gatgatgattccattaagtgtatgggttactgtcctcagataaacccgctgtggccagat
attacattgcaggaacattttgaaatttatggagctgtgaaaggaatgactgcgagtgac
ttgaaagaagtcgtaagccgaataacaaatgcacttgatttaaaagaatatcttcagaaa
actataaagaaactacctgcaggaatcaagcgaaagttgtgttttgctctgagtatgctg
gggaatcctcagattactctgctagatgaaccgtctacaggtatggatccgaaagccaaa
cagcacatgtggagagcaattcgaacggcatttaaaaataaaaagcgggctgctattcta
accactcattatatggaggaggcagaggctgtctgtgaccgagtggctatcatggtgtct
ggacagttaagatgcattgggacagtacaacatctaaagagtaaatttggaaagggctac
tttttggaaattaaattaaaggactggatagaaaacctagaaatagaccgccttcaaaga
gaaattcagtatattttcccaaatgcgagccgccaagagagtttttcttctattttggcc
tataaaattcctaaggaagatgttcagtccctttcacaatctttttctaagctggaagaa
gctaaacatacttttgccattgaagaatatagcttttctcaagcaacattggaacaggtt
tttgtagaactcactaaagaacaggaggaagaagataatacttgtggaactttaaacagc
acactttggtgggaaagaacacaagaagacagagtagtgttttga
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