Lacticaseibacillus paracasei BL23: LCABL_08520
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Entry
LCABL_08520 CDS
T00723
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
lcb
Lacticaseibacillus paracasei BL23
Pathway
lcb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LCABL_08520 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcb03400
]
LCABL_08520 (mutS)
DNA repair and recombination proteins [BR:
lcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LCABL_08520 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
Spectrin_SESTD1
MutS_III
ATG17_like
AAA_21
DUF3053
AAA_22
LprI
AAA_14
PRKCSH-like
PIN_8
Motif
Other DBs
NCBI-ProteinID:
CAQ65975
UniProt:
B3WC74
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Position
847927..850287
Genome browser
AA seq
786 aa
AA seq
DB search
MNEKILKTLEYDKIQQALLGQVVTANGRQLVQAMQPLTDPVAVQQALDETADGASALRLK
GGIPVPQLENIDPALKRVDIGAVLNGQELASISRVLQTVSAIDKFLTDLQDQIDFRQLYT
LQESLTVLPQLSRRLKTAVDPDGTLTDEASPQLHGVREQIKSIEGKIRGKMTNYTRGAQS
KYLSDPIVTIRDDRYVIPVKAEYRAKFGGVVHDQSATGQTLFIEPQVIVALNNRLREAQL
AEVAEINRILAELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPLVSADNDV
LLRDARHPLIDPHKVVGNDIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIP
ADDESRIGIFDEVFADIGDEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTD
PQEGAALAIAILDAVGEVGAYVVATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLL
VGVPGRSNAFDISARLGLPSVIVERAKSMISSDSHELNNMISDLEKQRKAAETAYEAARR
QLADAQSVHDELAAAYKKFTTERDAQLQQAKDKANSLVDKAQTKADKIIKQLRQMQLTNP
GTVKENQLIAAKTALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASYDQTGTLLEQF
DKKHWQVQLGILKMKVPTDEMEKIKPSKQSAAQRPVVKVSGGGMSGPSTTLDLRGERYDQ
AMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQYLKRNRQVKTYGFAPQNAGGSGA
TIVNFK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaagattttaaaaacccttgaatacgacaagattcagcaagcattgttgggt
caggtcgtgacagcaaatggccgccagctggtgcaggccatgcagccgctgaccgatcca
gtcgccgtacaacaggcactagatgaaaccgcagacggcgcatcggcgttgcgattaaaa
ggcggcattccggtgccgcaactcgagaatattgatccggcgcttaaacgagtcgacatt
ggggccgttttgaatggtcaagaactagccagcatcagccgtgtcttgcaaacggtgagt
gccattgataaatttttgactgatttacaggatcagattgattttcgccagctttacaca
cttcaagaatcgttaaccgtgttaccgcaattatcacggcgcttgaagacagccgttgat
cctgatgggacattgaccgatgaggctagtcctcagctgcatggtgttcgtgaacagatc
aaaagtattgaaggcaagatccgcggtaaaatgacaaattatactcgcggcgcccaatca
aagtatttaagtgacccgattgtgacgattcgggatgatcggtacgtgattccggttaag
gctgagtatcgcgccaaatttggcggtgttgtccatgatcaaagtgcgaccggccaaacc
ttgtttattgaaccgcaagtaattgtcgccttgaataatcgactccgtgaggcacaactg
gccgaggtagctgagattaaccgcatcttagccgaattgtctaatgaattagcgccttat
accggtcaaatcaaggcgaatgcggcggttcttgggcattttgacttcatcaatgcgaag
gcgagattagccaaggcggaaaaagcgacagagccgttagtgtcggctgataatgacgta
ttgttgcgtgatgctcggcaccccttgatcgacccgcataaggtggttggcaacgatatt
ccgttgggcgacaagtaccaagctatggttatcaccggcccgaataccggtgggaaaaca
atcaccctcaaaacattaggactgttgcagttgatggggcagtccggattgtttattcca
gctgatgatgaaagtcgtatcggcattttcgatgaagtctttgcagatattggcgatgaa
caatccattgagcaaaatttgtcgactttttctgcacatatggacaatattgttcatatt
ctcaaacaattgtcacagaatagtttagtgctgtttgatgaacttggcgccggcactgat
ccgcaagaaggtgcggcgctggcgattgcgatcttggacgcagtgggtgaagttggcgcg
tatgtagttgccacgacccattatccggaattgaagttgtatgggtacaatacagcaaag
acgattaacgcatcgatggaatttgacagcaaaacgctgcagccgacttatcgccttttg
gtcggggtacctgggcgctcaaatgcgtttgatatttctgcacgtttggggttgccgagc
gtgatcgttgagcgtgctaagtcaatgatcagctcggacagccatgagctgaataatatg
atcagcgacttggagaaacagcgaaaggcagcggaaaccgcttatgaagccgctcgtcgt
cagctagccgatgcacagtctgtccatgacgagctagcggcagcctacaagaagttcaca
acggaacgcgatgcccagttgcagcaggctaaggacaaggccaactcgttggttgacaag
gcccaaacgaaggccgataaaatcatcaagcaactgcgccaaatgcaattgacgaatccg
ggaactgtgaaagagaatcaattgattgctgccaaaacggcgcttaaacaattgcatcaa
gacgagccacttcagaaaaatcgcatcttgcgccgtgaacgtgagaaacaggcattgcat
gttggtgatgaggttaaagtggcaagttacgatcaaactggtaccttgctggagcaattc
gataagaagcattggcaggttcaactaggcattttgaaaatgaaggtaccaactgatgag
atggaaaaaatcaagccaagtaagcaatcagcggcgcaacgtccggttgtcaaagtaagt
ggcggcgggatgagcggcccatcgaccacgctggatttgcgcggcgagcggtatgatcag
gcgatggcggatttggatcaatacattgatgccgccttattggccggttatccatctgtg
acgattattcacggactgggcactggcgcgattcgcaacggggtgacccagtatcttaaa
cgcaatcggcaggttaaaacgtatggctttgcaccacaaaatgccggtggttcaggagct
accatcgtaaactttaagtag
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