Lacticaseibacillus paracasei BL23: LCABL_12190
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Entry
LCABL_12190 CDS
T00723
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lcb
Lacticaseibacillus paracasei BL23
Pathway
lcb03420
Nucleotide excision repair
lcb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LCABL_12190 (pcrA)
03430 Mismatch repair
LCABL_12190 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcb03400
]
LCABL_12190 (pcrA)
Enzymes [BR:
lcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCABL_12190 (pcrA)
DNA repair and recombination proteins [BR:
lcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LCABL_12190 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LCABL_12190 (pcrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
Terminase_6N
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAQ66304
LinkDB
All DBs
Position
1170681..1172936
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AA seq
751 aa
AA seq
DB search
MVMDAALKGMNDKQSEAVLATEGPVLIMAGAGSGKTRVLTHRIAYLVEEKHVNPWNILAI
TFTNKAAREMRERVGKLVDAEIARDIWVSTFHALCVRILRRDIDKLGYNRAFTIADPAEQ
LTLVKHILADFNLDPKRYDPKSILGAISSAKNELVDPQTYANEQANSPFTKVVAQVYAEY
QKRLRSDQALDFDDLIMQTIVLFEKDKETLAFYQRKFRYIHVDEYQDTNEAQYQLVHMLA
EGYHNLCVVGDADQSIYGWRGANMQNILDFKKDYPKAQVILLEQNYRSTKTILSAANNVI
QNNQNRQAKTLWTENREGDKITYYRAQSETDEAIFVIRRIEAEIADNHRKYGDFAILYRT
NAQSRAIEEAFVKSNIPYKMVGGHKFYDRKEIRDALAYFRLVVNPEDDMSFNRIVNEPKR
GIGNTSVEKLEAFANEHDWSLLEAAANAELSPIAGKARGQLAKFGKMIQQLGTRRKDLNV
TEMMQAILEDSGYLSTLRAAHNLEADTRIENLEELLSVTQGFDSRYQPENEDSDIFVDFL
AELALLSDQDDVEEDAQEVTLMTLHAAKGLEFPVVFLVGMEEGLFPLSRASMDESELEEE
RRLAYVGITRAKQKLYLSNAYGRMLYGQRQNNPASRFIEEINPDLLEVIGTTQPKSDIPF
INRTDRAFSSPYSRHADQKTATPVTVQAAPTTGAGKTSWEAGDKVKHRKWGTGTVVKVTG
IGDDQELDIAFKDNGIKRLLAAFAPIVKVAS
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggtaatggatgccgcattaaagggtatgaatgataagcaatctgaggcggtgttggcg
actgaagggccagtgctgattatggctggtgccggttcaggcaagacacgggtattgact
catcggattgcttatttagttgaagaaaagcacgtcaatccatggaacatccttgccatc
acgtttacaaataaggccgcccgtgagatgcgcgagcgggtcggcaagttggttgatgct
gagattgcgcgcgatatttgggtctcaacgttccatgcgctctgtgtccgaattttacga
cgcgacattgacaaattgggctataaccgtgccttcacgattgctgatccggctgagcaa
ctgacgctggtgaagcatattttggctgatttcaatcttgatccaaagcgctacgatcct
aaatccattttaggtgctatttcgagcgctaaaaatgagctcgtggatccacaaacttat
gccaatgagcaggctaacagtcctttcaccaaagttgtggcgcaggtttatgcggaatat
caaaagcgtctgcgcagtgatcaggcattggactttgatgatctcatcatgcagaccatc
gtgctttttgaaaaagacaaagaaacactggcattctaccagcgtaagttccgctacatt
catgttgacgaatatcaggacactaacgaagcacaataccagctcgtgcatatgttggca
gaaggctaccataatttatgtgtggttggtgatgccgaccagagcatttatggctggcgt
ggtgccaatatgcagaacattttggatttcaaaaaagactatccaaaggcgcaagtcatt
ttgcttgagcagaattatcggtcaactaaaacaattttgagtgcggccaataatgtgatt
cagaacaatcagaatcgccaagccaaaacgttatggacggaaaatcgcgaaggcgacaag
attacctattaccgcgctcaaagcgaaactgatgaagctatttttgtcattcgccgaatt
gaagcagagatcgctgataatcatcgcaaatatggtgattttgcgattctgtaccgaacc
aatgcgcagtcgcgggcgattgaagaagcgtttgtgaagtccaacattccatataaaatg
gttggcgggcataagttctatgatcgcaaggaaattcgcgatgcgctagcgtatttccgg
ttagtggtcaatccggaagacgatatgagttttaatcgaattgtcaatgaaccaaaacgc
ggtattggcaacacaagcgttgaaaagttagaagcctttgccaatgagcatgactggtcc
ttgctggaagcggcggcgaatgctgaactcagtccgattgctggtaaagctcgcggacag
ttagctaagttcggtaaaatgatccagcagctgggtacacggcgaaaagatctaaacgtg
accgagatgatgcaggcaattcttgaggatagtggctatttatcaacactgcgagcggcc
cacaatctggaagccgatacccgcatcgaaaacttagaagaattgctttcggtgacccaa
ggattcgattcccggtatcagccggaaaatgaagacagcgacattttcgttgattttctg
gctgaactggcgctgttatcggatcaggatgacgttgaagaagatgcacaagaagttacc
ttgatgaccttgcacgctgctaagggactggaatttccggttgtctttttagtggggatg
gaagaaggactctttccattgagtcgggcttccatggatgaaagcgagctcgaagaggaa
cggcgcttagcttatgtcggcattacccgtgccaaacagaagctgtatctgtccaatgcc
tatggccggatgctgtatggtcaacggcaaaacaatcctgctagccgtttcattgaagaa
attaatcctgacttgttggaagtcattggcactacccagccaaaaagtgacattccattt
attaatcgtactgatcgcgcattcagctccccgtatagccgccacgctgatcaaaaaaca
gcaacacccgttactgtgcaagccgcgccaacaacaggtgcaggcaaaaccagttgggaa
gctggcgacaaggtgaagcatcgcaagtgggggactggtaccgtggtgaaagtcacgggt
atcggcgatgatcaagaactcgatattgcttttaaagacaacggcatcaaacgactgcta
gctgcctttgctccgattgtcaaagtggcatcataa
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integrated database retrieval system
