Lacticaseibacillus paracasei BL23: LCABL_12260
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Entry
LCABL_12260 CDS
T00723
Symbol
trmA
Name
(GenBank) tRNA (Uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lcb
Lacticaseibacillus paracasei BL23
Brite
KEGG Orthology (KO) [BR:
lcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcb03009
]
LCABL_12260 (trmA)
Enzymes [BR:
lcb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LCABL_12260 (trmA)
Ribosome biogenesis [BR:
lcb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LCABL_12260 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Methyltransf_15
PrmA
Cons_hypoth95
TRM5-TYW2_MTfase
MTS
RrnaAD
Methyltransf_11
PabTrmU54_TRAM_dom
Methyltransf_ANTKMT
DUF7922
Motif
Other DBs
NCBI-ProteinID:
CAQ66311
LinkDB
All DBs
Position
1180716..1182089
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AA seq
457 aa
AA seq
DB search
MTNLAQPAVTKNQDLEVSIQDLTYEGMGVAKVDGFPLFIEDALPGEKMQVHVLKTQKQYG
FAKVVKRLSDSPDRVPGADSTYIRTGIAPLSILAYPAQLQFKQKQIQELYKKAHLDIAVL
PTIGMTNPLGYRNKAQVPVRTVNGELQTGFYKKHSHDLVPIEDFLIQDPKIDQAIVVVRD
LLRKYHVPAYDERANKGVIRNIMVRRGHYTKQMMIVLVSQTWQVPHLKDIVEEITLALPE
VTSVVVNLNDKRTNVILGRKSRTIYGEDYLLDKLLGSEFQISPVSFYQVNPVQTEVLYKK
AIEAAGLTGKENVIDAYSGIGTISLTMARHAKHVYGVEVVEPAVRDARANAVRNHIDNVT
FEVGKAEEVIQRWKDNELPVDVLMVDPPRKGLDKSFIDAVGYMKPPKIVYVSCNPATLAR
DLQLLAAFGYTAKETQPVDMFPQTQHIESITALALAK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgactaatttggcccaaccagctgtaaccaagaaccaagatctggaagttagcattcaa
gatctcacttatgaagggatgggcgttgccaaagtcgacggctttccgcttttcattgaa
gatgccctgcctggcgaaaaaatgcaggtgcatgtcctcaaaacgcagaagcaatatggc
tttgccaaagttgtcaaacgattgagcgactcaccggatcgtgttcccggtgcagatagc
acttatatccgcacggggattgcgccactgtcgatcttggcatatccggcacaattgcaa
tttaagcagaaacaaattcaagaactttataaaaaagcgcatcttgatattgcggtgctg
ccgaccatcgggatgacgaatcctttaggctatcgcaacaaggcgcaagtaccggttcgt
accgtgaatggcgaactgcaaactggcttttataaaaaacacagccacgacctcgtacca
attgaagactttctgattcaagatccgaaaattgaccaagccattgtggtggtgcgtgat
cttttacgaaaataccatgtgccagcttatgatgaacgcgctaataaaggcgttattcgt
aacatcatggtgcgccggggccattatacgaagcagatgatgattgtcttggtgtcacaa
acttggcaagtgccgcatctcaaagatattgtcgaagagatcaccttagcattaccagaa
gtaacgagtgtggttgtgaacttgaatgacaaacgaaccaacgtcattctaggccgcaag
tcacgaaccatttacggcgaggactatttgctggataagctgctaggcagtgaattccag
atctcgccagtcagtttttatcaggttaatccggttcagactgaggtgctttacaaaaag
gccattgaggctgctggtctgactggtaaggaaaatgtgatcgatgcttattcaggtatc
gggacgatttccttgacgatggcacgtcatgccaaacatgtttacggcgtcgaagtggtt
gaacctgctgtgcgcgatgcacgggcaaacgcggtgcgcaatcacatcgataatgtcacc
tttgaagtcggcaaggcggaggaggtcatccaacgctggaaagacaacgaactgccagtg
gatgtgctcatggtcgatccgccgcgcaaaggactggataaaagtttcatcgacgctgtc
ggttatatgaagccgccaaagatcgtctatgtgtcctgcaaccccgcgactttggcaaga
gatttgcagctgctagccgcctttggctacacagcaaaggaaacccagccagtggacatg
ttcccgcagacgcagcatattgagagtattacggctttggcgttggcgaagtaa
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