Lacticaseibacillus paracasei BL23: LCABL_12450
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Entry
LCABL_12450 CDS
T00723
Symbol
recQ1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lcb
Lacticaseibacillus paracasei BL23
Pathway
lcb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCABL_12450 (recQ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcb03019
]
LCABL_12450 (recQ1)
03400 DNA repair and recombination proteins [BR:
lcb03400
]
LCABL_12450 (recQ1)
Enzymes [BR:
lcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCABL_12450 (recQ1)
Messenger RNA biogenesis [BR:
lcb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LCABL_12450 (recQ1)
DNA repair and recombination proteins [BR:
lcb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LCABL_12450 (recQ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HHH
TadB_TadC_N
Motif
Other DBs
NCBI-ProteinID:
CAQ66329
LinkDB
All DBs
Position
1199374..1201152
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AA seq
592 aa
AA seq
DB search
MIAPQAETILKEKFGYDHFRAGQNQAISRVLAGESTLVVMPTGGGKSLCYQIPAMLLSGL
TLVVSPLIALMKDQVDALNDNGIPAAFINSTLDYQEIADRLDQARSGRIKLLYVAPERFD
TDWFVQRLGSTDISLFAIDEAHCISQWGHDFRPSYLNLANVAAQLPSQPPVIALTATATP
RVAQDICQRLAIPADGMINTGFERSNLSFKVVRDQDEDRYLLDYLKLNVDQAGIIYASTR
KEVDRLYTFLAHKKLPVAKYHAGMSEAQRAANQEDFLFDRKPIMIATNAFGMGIDKSNVR
FVIHAQIPKDVESYYQEAGRAGRDGLPSEAILLFKPQDLQVQRFFIDQSEGDDEHKQRQY
EKLKMMERYANTDQCLQQFILNYFGQSGTKPCGRCSNCLDDRESVDVTVDAQKVLSCVVR
LHERFGKGVVAQVLAGAHNQRVLSFHLDQLSTYGLMSSRRQRDITTFIDFLAAGGYLETR
GGQYPTLGLTAKGAEVLRGQAQVFQKTAQKAEQHLEVDDTVFQELRSTRRQLAEQQHLPP
YMIFSDKTLKAIGSAMPQSLDELMAVKGVGQAKLDKYGQIFLDVLQAIKAKA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgattgcgccgcaagcggagacaattttaaaggaaaaatttggctatgatcattttcgt
gctggtcaaaatcaggccatcagtcgcgttttggctggtgaaagcacgctggttgtgatg
ccaacaggcggcggaaaatcgttgtgttatcagattccagcgatgttgttgtcgggattg
acgctcgtggtgtcgccgctcatcgcgttgatgaaggatcaggtggatgcgctgaacgat
aacgggattccggcggctttcattaacagcacgctcgattatcaggagattgctgatcgc
cttgatcaagcaagaagtggtcggattaaattgttatatgttgccccagaacggtttgac
acggattggtttgtgcaacggcttggcagcaccgatatttcgttatttgcaattgatgaa
gcccattgtatttcccagtgggggcacgattttcggccgagttatttgaatctggcgaat
gtggcggctcaattgccttcgcagccaccggtcattgccttaactgcgacggccacaccg
cgagttgcgcaggatatttgccagcgactggcgattccggctgacgggatgattaatact
ggttttgagcgaagtaatctgagcttcaaggtcgtacgcgatcaggatgaagatcggtat
ctactagattacctgaaactgaatgtcgatcaggcaggcatcatctatgccagcacccgt
aaagaagttgaccgtttgtatacctttttggcacataagaagttgcctgtggccaaatat
cacgcgggcatgagtgaagcgcagcgtgctgctaatcaggaagattttttgttcgatcgc
aaaccaattatgattgcaacgaatgcgttcggcatgggtattgataaaagcaacgtgcgg
tttgtcattcacgcccagattcccaaagatgtcgaatcgtattatcaagaagccggtcgg
gctggtcgtgatggcttgccgagtgaggcaattttgctgtttaagccgcaagatctccag
gttcagcggttcttcatcgatcaatccgaaggcgatgacgagcacaaacagcggcaatat
gagaagttgaaaatgatggaacggtatgcgaacacagatcagtgtttgcaacagtttatt
ttgaactatttcggtcaaagcgggacaaaaccatgtggtcggtgttcgaattgtttggat
gaccgggaatcggtggatgttacggttgatgcgcagaaggtcttatcttgtgtggttcgc
ttgcatgaacgttttggcaaaggcgttgtggcgcaagtgctggcgggggcccacaatcag
cgggtattgtcgtttcatctagatcaattgtcaacttatgggttgatgagcagtcgtcgt
caacgcgacattacaacgttcatagattttctggcggctggcggttatttggaaactcgc
ggtggtcagtacccaactctgggcttaacggccaaaggcgctgaggttcttcgcggacaa
gcgcaagtattccagaagacggcgcaaaaagccgagcagcatcttgaagtcgacgacact
gtctttcaggaactgcgcagtactcggcgacaactggcggagcagcagcatttaccgcct
tatatgattttctctgataagacgttgaaggcaattggcagcgccatgccgcaaagtctt
gatgagttgatggcggtcaaaggcgtcgggcaggcgaagttggataagtatggccaaatc
tttttggacgtcctgcaggcgattaaggccaaggcttga
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