Lacticaseibacillus paracasei BL23: LCABL_15230
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Entry
LCABL_15230 CDS
T00723
Symbol
trmU
Name
(GenBank) Probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
lcb
Lacticaseibacillus paracasei BL23
Pathway
lcb04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lcb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LCABL_15230 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcb03016
]
LCABL_15230 (trmU)
Enzymes [BR:
lcb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
LCABL_15230 (trmU)
Transfer RNA biogenesis [BR:
lcb03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
LCABL_15230 (trmU)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
ThiI
DUF7411
6TM_PilS
QueC
Asn_synthase
Arginosuc_synth
AraC_binding
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
CAQ66604
LinkDB
All DBs
Position
1447738..1449069
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AA seq
443 aa
AA seq
DB search
MAKTGPSHLRPLALLFLTGVGPALAETRSQAQKPAHALSVAISSFTVIMVFTGIRPSNRI
SPESDEMMVIVLDNSNIRVVVGMSGGVDSSVTALLLKQQGYDVVGVFMKNWDDTDENGVC
TATTDYEDVAKVASEIGIPYYSINFEKEYWDRVFQYFLDEYKAGRTPNPDVMCNKEIKFK
AFLDYADQLNADYIAMGHYAQVKTDENGIVHMLRGADGNKDQTYFLSQLSQDQLKKSLFP
IGHLQKPEVRKIAEAAGLATAKKKDSTGICFIGERNFKQFLSTYLPAQPGKMMTVDGVEM
GTHDGLMYYTIGQRQGLGIGGNSDNSEPWFVVGKDLDKNILYVGQGFDNPALMATSLSAS
NLNWTTGQAPAEGTHMTAKFRYRQRDTGVTLHYHDDGTATVDFDVPVRAITPGQAVVFYD
GDECLGGGTIDAAYAHTNELQYV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaccgggccatcacacctaaggccacttgcactcctgtttctaactggggtg
ggtcccgctcttgctgaaacgcgttcgcaggcgcagaaacctgctcacgctctttcagtt
gctatctcatcattcactgttataatggtttttactggaattcgaccttcaaatcggata
tctccagaatctgatgaaatgatggtgattgttttggacaattccaacatccgtgttgtt
gtcggcatgtccggcggcgtggactcgagtgtcacggcgctgttgctgaaacaacaaggt
tatgatgtcgtcggggtctttatgaagaactgggacgacacagacgaaaatggcgtctgt
acagcaacaacggactatgaggacgtcgccaaggttgctagtgaaatcggcatcccatat
tactcgattaactttgagaaggaatattgggatcgggtttttcaatacttcctcgatgag
tacaaggctggccgcacaccaaaccctgacgtgatgtgcaacaaggagatcaaatttaag
gctttcttggactacgctgatcagctcaacgcggattatattgcgatgggtcactatgcg
caggttaagacagacgaaaacgggatcgtgcacatgcttcgcggcgctgatggcaataag
gatcaaacgtactttttgagccagctttcacaggatcagcttaagaagtcgcttttccca
attggtcatttgcagaaacccgaggttcgtaaaatcgccgaggcagcgggactggcaacg
gcaaagaagaaggactcgactggtatttgctttatcggcgagcgcaatttcaagcagttt
ttgagcacgtatctgccagctcagccgggcaaaatgatgacggtggatggtgtcgagatg
ggtacccatgatggcttgatgtattacacaatcggtcaacgccaaggcctcggcataggc
ggtaactcagataattctgagccatggtttgtggtaggcaaagatttagacaagaacatc
ttgtatgtcggccaagggtttgacaacccagccttgatggccaccagcttgagcgcttct
aaccttaactggacgactggtcaggcaccggcagaaggcacccacatgacggccaagttc
cgttatcgtcagcgggatacaggggtgacgcttcattatcatgatgatggcaccgccact
gttgactttgacgtgccagttcgcgcaatcacaccgggtcaggcggttgtcttttatgac
ggcgacgagtgcttgggtggtggaaccatagatgctgcatacgcacacacgaatgagtta
cagtacgtttaa
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