Lacticaseibacillus paracasei BL23: LCABL_15520
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Entry
LCABL_15520 CDS
T00723
Symbol
holA
Name
(GenBank) DNA-directed DNA polymerase III, delta chain
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lcb
Lacticaseibacillus paracasei BL23
Pathway
lcb03030
DNA replication
lcb03430
Mismatch repair
lcb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCABL_15520 (holA)
03430 Mismatch repair
LCABL_15520 (holA)
03440 Homologous recombination
LCABL_15520 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcb03032
]
LCABL_15520 (holA)
03400 DNA repair and recombination proteins [BR:
lcb03400
]
LCABL_15520 (holA)
Enzymes [BR:
lcb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCABL_15520 (holA)
DNA replication proteins [BR:
lcb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCABL_15520 (holA)
DNA repair and recombination proteins [BR:
lcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCABL_15520 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
DUF4192
Spb1_C
TMEM214
Motif
Other DBs
NCBI-ProteinID:
CAQ66633
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All DBs
Position
1481519..1482562
Genome browser
AA seq
347 aa
AA seq
DB search
MQVRDFIKHLKNGERPPLTLILGEESALRQQAQHAIASMIPEDQQAMNFGRYDMQQTPVG
AALNDATSMPFFGDYREVVIDDPYFLTGEKNADKIDHDLAGLQAYFENPVPSTMMVIIAP
YKKLDERKRLTKALKKAALIVNAAPLDEREARAALAQTFKKHQVTIDAPALDTLVQRTNG
QYSIMMGEVRKLLTYASDGSPLTVAAVEALVPKQLNDRVFDLVTDVLRKNAAAALALYRD
LLAQREEPIRLNALMLGQFRLLLQVKLLAKKGYSQGDIAGTLKAHPYRVKLAMRQVDRLP
YQQLATAYSGLVDTETAMKTGTIDKALAFELFMLKYTGQQSGKHVRG
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtccgtgattttatcaaacatcttaagaatggcgaacgaccgccgctgacattg
attctcggtgaagaatccgcattgcgtcagcaggcacaacacgcgatagccagcatgatt
ccggaagatcaacaggccatgaactttggccggtatgatatgcagcaaacgcctgtcggt
gcagccttgaatgatgcgacctcaatgcccttttttggggattatcgggaagtcgttatt
gacgatccgtattttttgacaggcgaaaaaaatgccgacaaaatcgatcatgatcttgct
ggtttgcaggcttattttgagaacccagtaccgtcaacgatgatggtcatcatcgcgcct
tataagaaacttgatgaacggaaaaggttgaccaaggcattgaaaaaggcggcgctcatt
gtgaatgcagcaccgcttgatgaacgggaggcgcgtgctgctttagcccaaacatttaag
aagcaccaagtgaccattgatgcaccggcattggatacccttgtgcagcgcactaacggc
cagtattcgatcatgatgggtgaggttcgcaaactgctgacctatgccagtgatggcagt
ccgctgaccgttgcagcggtcgaagccctggtacctaagcagctcaatgatcgggtgttt
gacttggtgactgatgttttgcgcaaaaatgctgcggccgctttggcgctgtatcgtgat
ttattggctcagcgtgaagaacccattcgtttgaacgcattgatgcttggccagtttcga
ctattgctgcaggtgaaattattagcaaaaaaagggtatagtcaaggcgatattgctggc
accctcaaggcccatccatatcgggttaaattagccatgcggcaagtggatcgcttacct
tatcagcagctcgcgactgcctacagtggcttggttgatactgaaacagcaatgaaaacg
ggaactatcgataaggcgttggcttttgaactatttatgctaaagtacacaggacagcag
tctggcaagcatgtgcgcggttaa
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