Lacticaseibacillus paracasei BL23: LCABL_15830
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Entry
LCABL_15830 CDS
T00723
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lcb
Lacticaseibacillus paracasei BL23
Pathway
lcb03030
DNA replication
lcb03430
Mismatch repair
lcb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCABL_15830 (dnaE)
03430 Mismatch repair
LCABL_15830 (dnaE)
03440 Homologous recombination
LCABL_15830 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcb03032
]
LCABL_15830 (dnaE)
03400 DNA repair and recombination proteins [BR:
lcb03400
]
LCABL_15830 (dnaE)
Enzymes [BR:
lcb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCABL_15830 (dnaE)
DNA replication proteins [BR:
lcb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCABL_15830 (dnaE)
DNA repair and recombination proteins [BR:
lcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCABL_15830 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
CAQ66664
LinkDB
All DBs
Position
1516463..1519759
Genome browser
AA seq
1098 aa
AA seq
DB search
MTFTQLQVHSNYTLLHSPLALSDLISAAKSRGYSAIALTDTNVVYGLVEFYRQAKAAGLK
PLLGMQIAIDDAKLLVIAKNNQGYHQLLKISTQIMLATSPVAFADLLPLTGLVAITLPDS
PFSAAVVANDHNRAVAFLQELDNKQPEAVYVGLDEAHLDTPLPTFATSQQLHLMALGNVL
YRDPTDAFTQKVMAAIGDGSQLNFRDPVLTDAGPWWLKPPADASAPFVAAGLQAAVDNAA
QIADQTDVTITFKQPQLPHYQTPDQLASKDYLTKLAQEGLANRFHDQPIPTTYQQRLQYE
LDVIIKMGFADYFLVVWDVMNYAHKVNIMTGAGRGSAAGSLVSYALAITEVDPIAYDLLF
ERFLNPARAQMPDIDLDIPDNRRGELIQYVHDKYGRNHMAQIITFGTFGAKQAIRDVARV
FGMSQFESNTWSRAIPNLLHMDLKTAYDQSQPLKNLVADSPKNRMLFQTALALEGLPRHY
STHAAGIVLSEEPLTDTVALQPSGDGLEQTQVPKDDVEALGLLKMDFLGLKNLNILAAAS
HFVTRDTGRTFDPKQIPLNDQPTLALFARGDTNGVFQFESAGIKNVLRKLRPTDFEDVVA
VNALYRPGPMENIDTFIARKNGQEPIAYPDPALEKILKPTYGVLVYQEQVMQVASVMGGF
SLGEADLLRRAMSKKKSSVLAAEQDKFIEGAVKQGFPEATAKTVYAYIDRFANYGFNRSH
AVAYSMVAFWLAYLKVHDPAAFFAALMNASMNNLPKLRTYVQEAKARQVALLGPDINTSN
GGFKLSDGKIRFGLLSVKGMRRDFSEAIFTARKNGPFKDFRDLLQRLEPKWLKADNFKPL
ILAGAFDSFDDNRAQTIANLDELINSVKLAGNDVGLFSVLAPKPIVVPEMPAGERLEEEA
NVLGVYLSGHPVDKYAPLKTQYTLVNVVDLAEGRTVDILLLVRHIKRIRTKTGKPMAFVD
GQDATGTVSLTVFPNLYPTLEKIETDMVVLVNGRVEKRNDDLQLIVNRIQDAAPLLEALP
KAQLFIRLDADNVDARTDLLKKLQTAHGPIPVITVDTTSKESVLLDKRYWVTADTSLMAD
LESRFGAANVVLRKRQEE
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttacccaattacaggttcatagcaattataccttattacacagcccgttggca
ctgtcggatcttatcagcgcagcaaaatcacgcggttattcggccattgccttaacggac
actaatgttgtttatggtttagtcgagttttatcgacaggcgaaagcggctggcttgaag
ccgttattaggcatgcagatcgcgattgatgatgccaaacttttagtgattgccaaaaat
aatcagggctaccatcagttacttaagatctccacgcagattatgctagcaacttcgccg
gtggcctttgcggacttattgcctttgacaggcttagtcgccatcaccttaccggattca
ccattttcggcggcagttgttgctaacgatcacaacagagctgtcgcttttttacaggag
cttgataataaacagccggaagcggtgtatgttggtctggatgaggctcatttagatacg
ccattgccgacatttgcgactagtcagcaacttcacctaatggcgttaggtaacgtactg
tatcgtgatccgactgatgcttttacgcaaaaagtgatggcagcgattggtgatggcagt
caattgaactttcgtgacccagttttaaccgatgctgggccatggtggttaaaaccgcca
gcagatgcaagtgcaccttttgttgctgctggactacaggcggcagttgacaacgcggct
cagatagcggatcaaacggatgtgacgattacgttcaagcagccccagctacctcattat
caaacgccagatcagcttgcgtctaaagattacctgaccaaactggctcaagaaggcctc
gctaaccgttttcacgatcagccgattccgacaacctatcagcagcgtttgcaatatgag
ctggatgtcattatcaaaatgggatttgctgattactttctggtggtttgggatgtgatg
aattacgctcacaaggtcaatattatgactggggctgggcgaggatcagctgcgggctcc
ttggtcagttacgcgctggctattacagaagtcgatccgattgcttatgatctgctgttt
gaacggtttctgaatcctgctcgagcgcaaatgcctgatattgatttggacattcctgat
aaccgccgtggcgagctgattcaatatgtccatgacaaatatggccgaaatcacatggcc
cagattattacttttgggacgttcggcgcgaaacaggcgatcagagatgtggcacgcgtt
ttcggcatgagtcagtttgaaagtaatacttggagcagagcaattccaaacttgctgcac
atggatttaaaaacagcatacgatcagagtcagccgttgaaaaatttggtggccgattca
ccaaaaaatcgcatgctgtttcaaaccgctttagcattagaggggttgccgcgacattat
tccacgcatgcagccgggattgtgctttctgaagaaccactaactgacaccgttgccttg
caacccagtggtgatggtcttgaacagacgcaggtacccaaagatgatgttgaagccctt
gggctgcttaaaatggattttctgggtttgaaaaacctcaatattttagccgccgccagt
cattttgtcacccgtgatactggccggacgtttgatccaaaacagattccgctgaatgat
caaccgacactcgctttgtttgcccgcggtgatactaacggcgtttttcaattcgagtct
gctggtatcaaaaatgttttgcgaaaactgcggccaactgattttgaagatgttgtggct
gtcaatgccttgtatcgtccaggtccaatggaaaacatcgacacgttcattgcccgcaaa
aatgggcaagaaccgattgcttatcctgatccggccttggagaagattttgaaaccgaca
tatggtgtcttggtttatcaggagcaggtcatgcaggtggccagtgtcatgggcgggttc
agtcttggcgaggcggatttgttgcggcgggccatgagtaagaagaaatcatcagtgctg
gcagccgaacaggataaattcattgaaggtgcggtcaagcaaggattccctgaggcgact
gccaaaacggtttatgcttatattgatcgatttgcgaattacggcttcaatcgttctcac
gcagttgcttatagtatggtcgcattttggttagcgtatttaaaagtgcatgatccagcc
gccttttttgcggcattgatgaatgctagtatgaataatttgccgaagctccggacttac
gtacaagaagccaaagcgcgtcaggtagctttattaggtcctgacatcaacaccagcaat
ggtggctttaagttgagcgacgggaagattcgctttggacttttgtctgtcaaagggatg
cgccgcgacttttccgaagccatttttaccgctcgtaaaaatggcccgtttaaagatttt
cgcgatttactacagcgcctcgagccgaagtggttaaaggcagataatttcaaaccattg
attcttgccggtgcctttgatagctttgatgataaccgggcacagacaattgcgaactta
gatgaattaatcaactcggttaaacttgctggcaatgatgttgggttattttcagtgcta
gcgcctaaaccgattgtggtgccggaaatgccggcaggcgaacggcttgaagaagaggct
aatgttttaggcgtttacctttctggtcatccggttgacaaatatgcccctttgaaaacg
caatacacattagtcaatgtggtggatttagcagaaggtcgcacggttgatattttgctt
ctggttcgacacattaagcggatccggaccaaaactggaaagcctatggcgtttgtggat
ggacaggatgcgactggcaccgtttcgctgacggtttttcccaatctatatccaacatta
gaaaaaattgagaccgacatggtggtactagtgaacgggcgagttgaaaaacgcaatgac
gacttgcaactcattgtgaaccggattcaagatgccgcaccgttgcttgaggccttacca
aaagcacagttatttattcgcttggatgcggataatgttgatgcccggaccgatttactg
aaaaaattgcaaactgcccatggaccaattccagttatcactgtcgacacgaccagcaag
gagagtgttttgttagataagcgatactgggtcactgctgacaccagcttgatggctgat
cttgaatcgcggtttggtgcggctaatgtggtgttgcgaaaacgacaagaagaatag
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integrated database retrieval system
