Lacticaseibacillus paracasei BL23: LCABL_15990
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Entry
LCABL_15990 CDS
T00723
Symbol
rpsA
Name
(GenBank) 30S Ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
lcb
Lacticaseibacillus paracasei BL23
Pathway
lcb03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
lcb00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LCABL_15990 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
lcb03011
]
LCABL_15990 (rpsA)
Ribosome [BR:
lcb03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LCABL_15990 (rpsA)
Bacteria
LCABL_15990 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
RNase_II_C_S1
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
CAQ66680
LinkDB
All DBs
Position
1533040..1534359
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AA seq
439 aa
AA seq
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MSDNNVNENTETMADALKSVTTVKIGDTVKADVLAVEDKQLIVGIEGTGVEGVVPIKELS
TQPIDDIHDVAKVGDKLDLVVLSTVGKDKENGQFLLSKRRLEAQKVWKEIQAKYEAGETI
TAPVTSVVKGGLVVNAGVRGFVPASMVEDHFVEDLSQYKGKELEFKIIEIEPSENRLILS
HRAIVEASKAEARKEIFAKIQPGDTVEGKVARLTNFGAFVDLGGVDGLVHVSEISFDHVD
KPSDVLKVGQEIKVKVLNVDPDRNRISLSIKATLPQPWDDIEEKAPAGSVLTGTVKRLTT
FGAFVEVFPGVEGLVHISQISHEHVATPADVLKEGQEVQVKVLSVDPDAHRLALSIKALQ
ERPAGSEEESHEGGNSSRDNSDRGDRRRSSRPRRGNDRHQSTSIPAEYQQDDSGFSLGDI
LGDALKDAAKGNDDQDDNK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataataacgttaatgagaacaccgaaacaatggcggacgcccttaagagtgtc
accacagtaaagattggtgataccgtcaaggcagacgttcttgccgttgaagataaacaa
ttgatcgttgggatcgaaggaacaggcgtcgaaggcgtggtcccgatcaaggagttatca
actcagccaatcgatgacattcacgatgttgcaaaagtcggcgacaagcttgatttagtt
gtgctttcaacggttggcaaagataaagagaatgggcagttcctgctgtccaagcgccgt
ttggaagcgcaaaaggtttggaaagaaatccaagctaagtatgaagcaggtgaaaccatc
accgctccggttaccagcgtcgttaaaggcggactggttgttaatgccggtgttcgtggc
ttcgttcctgcatccatggttgaagatcattttgttgaagatcttagccaatacaagggt
aaggaacttgaattcaagatcattgaaatcgaaccaagtgaaaatcgtctgattctttca
catcgtgcgattgttgaagccagcaaggctgaagcacgcaaggaaatctttgcgaagatt
caacctggcgataccgttgaaggtaaagttgctcgtttgaccaactttggcgcctttgtt
gatcttggcggcgttgatggtttggttcacgtttcagagatttcgtttgatcatgttgac
aagccaagcgatgttctgaaggttggtcaagaaatcaaggttaaggttctgaacgttgat
cctgatcgcaaccgcatttccttgtccatcaaagcaacgttgccacaaccttgggacgac
attgaagaaaaggcaccggccggctctgttttgactggtacagttaaacgtttgaccact
tttggtgcctttgttgaagtcttccctggtgttgaaggtttggttcatatttcccagatc
tctcacgaacacgtagcaaccccagcggatgtccttaaggaaggccaagaagtgcaggtc
aaggttctttccgttgaccctgatgcacatcgtcttgctttgtccatcaaggctttgcag
gaacgtccagcaggttctgaagaagaatctcatgaaggcggcaacagcagtcgtgacaat
agcgaccgtggtgaccgtcgtcgttcttcacgtcctcgtcgtggcaatgatcgtcatcaa
tccacgtcgattcctgctgaatatcagcaagatgattcaggcttctcacttggcgacatc
ttaggcgatgccttgaaagatgctgctaagggcaatgatgatcaggatgataacaagtag
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