Lacticaseibacillus paracasei BL23: LCABL_17830
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Entry
LCABL_17830 CDS
T00723
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lcb
Lacticaseibacillus paracasei BL23
Brite
KEGG Orthology (KO) [BR:
lcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcb03016
]
LCABL_17830 (truB)
Enzymes [BR:
lcb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LCABL_17830 (truB)
Transfer RNA biogenesis [BR:
lcb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LCABL_17830 (truB)
Prokaryotic type
LCABL_17830 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TMP_3
Motif
Other DBs
NCBI-ProteinID:
CAQ66863
UniProt:
B3WER2
LinkDB
All DBs
Position
complement(1726359..1727279)
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AA seq
306 aa
AA seq
DB search
MKGTAMNGILPLYKPTGMTSADAVYHARKILGIKKIGHSGTLDPNVDGVLPLAIGAGTKA
VPQLMASGKVYTGEITLGFATTTEDLDGEVVDKTPLTQPFTADQLDAALTAWTGNITQIP
PMFSAVKVNGRRLYEYARAGETVKRPERQATVSQFTRTDEPVFSATDGTQRFRFEVHVSK
GTYIRTLAVDVGKTLGVAAVMSQLTRVKSGGFTLKQAVSIEQLKAHAAAGTLADVIQPID
IAFADLPQVDLTVEQFEAISHGRFLSLDQQTPRVRLHFAGVLKAIYRREDDQYRPDLMFL
ANEKNV
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaactgccatgaacgggattttgccgttatataaacccactggcatgaccagt
gctgatgcggtgtatcatgcccgcaagattcttggtatcaaaaaaattggccattccggt
acccttgatcctaatgtggacggcgtgctgccgctggcgattggtgcaggcactaaagcg
gtgccgcaattaatggccagtgggaaagtctacaccggagaaatcacgttaggttttgcg
acgacaaccgaggatttggatggggaagttgttgataaaacgcctttaacgcagccgttt
acagctgatcagttggatgctgcattgactgcgtggacaggaaacatcacacagattccg
ccgatgttttcggcggtcaaagtcaatggtcgccggctttacgaatatgcgcgcgccggt
gaaactgtgaagcggccagaacgacaggccacggtgtcacagtttacacgtaccgatgaa
ccggttttttcagccactgatggcacccagcgttttcggtttgaggtccatgtttctaag
ggaacctacattagaacactagcagtggatgttggcaaaacgctgggagttgctgcggtg
atgagtcaattgacgcgagtaaaaagcggcgggtttacgttgaagcaggcggttagcatt
gagcaattgaaggcgcatgccgcggcaggtactttagccgatgtgattcaaccgattgat
attgcttttgccgatctgcctcaagttgatttgaccgtagaacaatttgaggcaatcagt
catggccgctttttatcgctcgatcagcagactccgcgcgttcgtctgcattttgcaggc
gttcttaaggctatctatcgccgagaagacgatcagtatcggccagatttaatgttttta
gctaatgaaaagaatgtgtga
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