Lacticaseibacillus paracasei BL23: LCABL_19270
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Entry
LCABL_19270 CDS
T00723
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM)
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lcb
Lacticaseibacillus paracasei BL23
Pathway
lcb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCABL_19270 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcb03400
]
LCABL_19270 (mutM)
Enzymes [BR:
lcb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LCABL_19270 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LCABL_19270 (mutM)
DNA repair and recombination proteins [BR:
lcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LCABL_19270 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
BapA_N
GGDEF_2
Auto_anti-p27
RNHCP
Motif
Other DBs
NCBI-ProteinID:
CAQ67006
LinkDB
All DBs
Position
complement(1863070..1863918)
Genome browser
AA seq
282 aa
AA seq
DB search
MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVGSEITTIDRRGKYL
LMRLSNGETIISHLRMEGRYYVVKDASTPFDKHDHVTFTFQDGSQLRYRDLRKFGRMRLI
KTGQEDQVPALAKLGPEPTPRTFDETEFARRLKRHHKPIKSVLLDQTVVAGVGNIYADEV
LWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAHTYVDAEGNRGSFQNALH
VYDREGTPCDRCGTTIVKIKVGQRGTHYCPHCQPLHQRRRPA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagtggaaacagttcgccgctcgcttctgccgttagtcaaaaat
aaagtcattaccgccatcaacactaactgggagaaaatcctgatcaatgggttggcgact
tttcaaaaggaaattgtcggcagtgagatcacgaccattgatcggcgcggcaagtatctt
ttgatgcgcctcagcaatggtgaaacgattatcagccatctgcgtatggaagggcgttat
tatgttgtcaaagatgcaagcacaccttttgataagcatgatcacgttacgttcacattt
caggatggtagtcagttgcggtatcgggatctgcgaaagttcggtcggatgcgattgatt
aaaactggtcaggaagatcaggtgccagctcttgctaagctcggaccggaaccaacgcca
cgcacgtttgacgagactgagtttgcccggcgcctgaaacgccatcataaaccgattaag
tcggttttactcgatcaaaccgtggtcgctggtgtgggcaatatttacgctgatgaggta
ctttggttaagtcggctcaatccgctgcagccagctgacaccttgaaatctaaagaaatc
aaaacactgcatgacgcgattatccaagaattaaatgcagccattgcggcaggcggcacc
agcgcgcatacgtatgttgatgcagaaggcaatcgcggttcttttcaaaatgccttgcac
gtctatgatcgggaaggtaccccgtgcgatcgctgcggcacgacgattgtcaaaattaag
gttggtcagcgcggaacccattactgcccgcactgtcagccattacatcaaaggaggcgg
ccagcgtga
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