Lacticaseibacillus paracasei BL23: LCABL_19430
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Entry
LCABL_19430 CDS
T00723
Symbol
cbf
Name
(GenBank) CMP-binding factor
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lcb
Lacticaseibacillus paracasei BL23
Brite
KEGG Orthology (KO) [BR:
lcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcb03019
]
LCABL_19430 (cbf)
Messenger RNA biogenesis [BR:
lcb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LCABL_19430 (cbf)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
CAQ67022
LinkDB
All DBs
Position
complement(1879059..1880027)
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AA seq
322 aa
AA seq
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MVKRLFDYHNEEDVRLPVLIKSAEVRVAKNGKKFIAMIFQDNSGHISGKFWDASDNDIAQ
FKAGEVVQLSGKRELYQGNPQIKIFSLRLATQEEGNDPKAFVERAPEAPSDMEEELNSYI
FEITNANWNRIVRKLINDHKKAFFSYPAAKSNHHAFAGGLAFHTLSILRLAKSVVQQYSS
LNKSLLYAGAILHDLGKTIELSGPISTDYTVEGNLIGHIVLIDEQIVLAAQQLKIDINAE
DMLLLRHVVLAHHGLLEYGSPVRPELLEAQVLHDLDELDASINMMTTAYQHVDPGTFTER
LFGMDNRRFYRPKNGQTFPDPH
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaaacggcttttcgattatcataatgaagaagatgttcggcttcctgtgctgatt
aaatcagctgaagtgcgtgtcgcaaagaatggcaaaaaatttattgcgatgatttttcaa
gacaattcaggacatatttcaggtaagttctgggatgctagcgacaatgacattgctcag
tttaaggctggcgaagtcgtccaattgtcgggtaagcgtgaattatatcaaggcaatccg
caaattaagattttttcattgcggttggcaacccaagaagaaggcaatgatcctaaagcc
tttgttgagcgggcgccagaagcacccagtgatatggaagaggaactgaacagttacatc
ttcgaaatcaccaatgctaactggaatcgaattgtccgtaaactgatcaatgatcacaag
aaggcatttttcagttatccggccgccaagtcaaatcaccatgcttttgctggtggtctc
gcttttcatacgctaagcatcttgcgacttgctaaaagtgtcgttcaacagtattcgagc
ttgaacaaaagcttgctatatgcaggcgcaattttacatgatctcggtaagaccattgag
ttaagcgggccaatctcaactgattacacggttgaaggcaacttgattggtcacatcgtt
ctcattgacgaacagattgtcttagcagcacaacaacttaaaattgatatcaacgctgaa
gatatgctcttactacgtcatgtcgtgcttgcacatcacggattgcttgaatacggctcg
ccggtgcggccagagctgcttgaagcgcaagtgttgcatgatttagacgaattggacgca
tcaatcaatatgatgacaaccgcctaccaacatgttgatcctggtaccttcacagaacga
cttttcggtatggacaatcgtcgcttctatcgacctaaaaatggtcaaacttttccggat
ccgcactag
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