Lacticaseibacillus paracasei BL23: LCABL_24390
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Entry
LCABL_24390 CDS
T00723
Symbol
holB
Name
(GenBank) DNA-directed DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lcb
Lacticaseibacillus paracasei BL23
Pathway
lcb03030
DNA replication
lcb03430
Mismatch repair
lcb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCABL_24390 (holB)
03430 Mismatch repair
LCABL_24390 (holB)
03440 Homologous recombination
LCABL_24390 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcb03032
]
LCABL_24390 (holB)
03400 DNA repair and recombination proteins [BR:
lcb03400
]
LCABL_24390 (holB)
Enzymes [BR:
lcb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCABL_24390 (holB)
DNA replication proteins [BR:
lcb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCABL_24390 (holB)
DNA repair and recombination proteins [BR:
lcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCABL_24390 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CAQ67505
LinkDB
All DBs
Position
complement(2393143..2394120)
Genome browser
AA seq
325 aa
AA seq
DB search
MTKFLIDSLQPKLVAQFARIIDRKQLAQSYLFVGPKGAGKLALAEWIALRLFCQNVQDGA
PCGQCPECERILNHNHPDVMVVKTETQSIKVDDIRGLKQEMSKTGVEGNQRVFVVEDADK
MTAGAANSLLKFFEEPVPGMTVILTATSKNQLLPTILSRAQVITFQSPDRSAVIAKLEEG
GATSQMARVAGRLTGNVADAQALLASATFQDRVTKVFQLLERLADHDPESFVRVQTQLLP
IAKDADSQRQVLALIGLAYADALNQHFQVTSMQQLDLPAIGVLAQRSSEQLTTALQAILT
AQVRLSQNVTFQSATEQLMLKLLEG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtttttaattgattcgcttcagcctaaactcgtggctcagtttgcgcgaatc
attgaccgcaagcaattggcacagtcgtatttgtttgtggggccaaaaggggctggcaag
ctggccttggctgagtggatcgccttgcgcctattttgccaaaatgtgcaggatggtgcg
ccatgtggccagtgtcctgagtgcgagcgaattttgaatcataaccacccagatgtgatg
gtggtcaaaacagaaacgcaaagcatcaaggttgacgatattcgcgggttgaagcaagaa
atgagcaaaaccggggtcgaaggcaatcaacgtgtgtttgttgttgaagatgctgataaa
atgacagcaggtgcggcaaactctttattgaaattttttgaggaaccagtgcctgggatg
accgtgattttgactgcaacctcgaaaaatcaacttttaccgaccattttgtcgcgggcg
caggttattacattccaaagccctgatcgctctgccgtgattgcaaagctagaagaaggc
ggagcaacctcgcaaatggcacgagtcgcaggccgattgactggcaatgtggctgatgcg
caggccttgttggcgtctgcaacatttcaagaccgggtgacgaaggttttccagttactg
gagcgtttggcggatcacgatccggaaagttttgttcgggtgcagacgcaactgctgccg
attgctaaagatgctgatagtcagcgtcaagtgttggcgctgatcggcttggcctatgct
gatgcattgaatcaacattttcaggtaacatcaatgcaacaactggacttgccggcgatc
ggcgtcttggctcagcgatcaagtgagcaactaaccacggcgctgcaggctatcttaacg
gcgcaggtgcgattgagccagaatgttacgtttcaatccgcaacagaacagttaatgctt
aaactattagaagggtga
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