Lacticaseibacillus paracasei BL23: LCABL_26450
Help
Entry
LCABL_26450 CDS
T00723
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha (RNAP subunit alpha) (Transcriptase subunit alpha) (RNA polymerase subunit alpha)
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lcb
Lacticaseibacillus paracasei BL23
Pathway
lcb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lcb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LCABL_26450 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcb03021
]
LCABL_26450 (rpoA)
03400 DNA repair and recombination proteins [BR:
lcb03400
]
LCABL_26450 (rpoA)
Enzymes [BR:
lcb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LCABL_26450 (rpoA)
Transcription machinery [BR:
lcb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LCABL_26450 (rpoA)
DNA repair and recombination proteins [BR:
lcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LCABL_26450 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
CAQ67711
UniProt:
B3WAJ2
LinkDB
All DBs
Position
complement(2598059..2598997)
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPNITKVDESTNYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAISSIQIDGVL
HEFSTIDGVLEDVTQIILNIKKLALKMNTDEDKNIEIDVNGPAKVTAADIVADPDVEVLN
PEQYICTVADGGHFHVRMTVKKGRGYVAADQNKSDDMPIGVLPIDSIFTPISRVNYQVES
TRVGRRNDFDKLTLDVWTNGSISPREAISLAAKILTEHLDIFVNLTDEAKNAEIMVEKEE
THKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTNKTEADMMKVRNLGRKSLEEVKNK
LADLGLGLRKED
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaattcgaaaagccgaacattaccaaagttgacgaaagcaccaactatggcaag
tttgtggttgaaccgttggaacgcggctacggtactactttaggtaactcgttgcggcgg
atccttctttcttcattgcctggggcagctatcagcagcatccaaatcgacggggtacta
catgagttctccacgattgacggtgtgctggaagatgtgacccagatcattttgaatatc
aaaaaattggcactcaaaatgaacactgatgaagacaagaacatcgaaattgatgtcaac
ggtccggctaaggtaactgctgctgatatcgtcgctgatcctgatgttgaggtcttaaat
cctgaacagtatatctgtactgttgcagatggcgggcacttccatgtacgtatgaccgtt
aaaaagggtcgcgggtatgtggcagctgaccaaaacaagtctgatgacatgccaatcggt
gttttgccgatcgactcgattttcaccccgatcagccgggttaactatcaagttgaaagc
acccgtgttggccgtcggaatgatttcgacaagttaacgctggatgtatggactaatggc
tcaatctcaccacgagaagccatcagcttagcagcgaagatcctgacagaacacttggac
atcttcgtcaatttgacggatgaagccaagaacgctgaaatcatggttgaaaaagaagag
actcacaaggaaaagatgcttgagatgactatcgaagagcttgacttgtccgttcgttct
tacaactgcttgaagcgtgctgggatcaacacagttcaggagttaaccaacaaaacagaa
gccgatatgatgaaagtacgtaatttaggtcgtaagtcacttgaagaagttaaaaacaag
ttggcagatctcggcttaggattgcgtaaagaagactaa
DBGET
integrated database retrieval system
