Lacticaseibacillus paracasei BL23: LCABL_27400
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Entry
LCABL_27400 CDS
T00723
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase, delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lcb
Lacticaseibacillus paracasei BL23
Pathway
lcb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lcb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LCABL_27400 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcb03021
]
LCABL_27400 (rpoE)
03400 DNA repair and recombination proteins [BR:
lcb03400
]
LCABL_27400 (rpoE)
Transcription machinery [BR:
lcb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LCABL_27400 (rpoE)
DNA repair and recombination proteins [BR:
lcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LCABL_27400 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Patatin
Motif
Other DBs
NCBI-ProteinID:
CAQ67791
LinkDB
All DBs
Position
complement(2695827..2696498)
Genome browser
AA seq
223 aa
AA seq
DB search
MKLKAFANADKSELSMIEVAHEILKEKGDTMAFVDLANEIQNYLGKRDEEIRERLPQFYT
DLNVDGSFISLGDNVWGLRAWYPYDSVDEEVNHPEDEEEAPRRKKRKKVNAFLADVADDD
DVIDYNDDDPEDEDLDADSDDDDDFDDDDSGFHDKVGKTTDTDDDSDDDPDDGLPDGIEG
QLAEFGDDDSDDDDDNDDITADFSDDDDDDSDSDDDDDSDTKK
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactcaaagcatttgccaatgccgataaatcagaattatcaatgatcgaagtagcc
catgagatcctcaaagaaaaaggggataccatggcgttcgttgatctggccaacgagatc
cagaattatcttggtaagcgtgacgaagaaattcgtgaacgtttaccgcaattctacacg
gatctgaacgtggatggcagtttcatttctttaggcgataacgtttggggcctgcgcgct
tggtatccatacgattccgttgatgaagaagttaaccatccggaagatgaagaagaggca
ccacgtcgtaagaagcgtaagaaggtcaatgccttcttagcagacgttgccgatgatgat
gacgtgatcgactataacgatgatgatcctgaagatgaggatctcgacgcagatagcgat
gacgacgatgatttcgatgacgatgactcaggcttccacgacaaggtcgggaagacgact
gacacagacgatgacagtgatgacgacccagatgatgggttgccagatggtatcgaaggt
cagctagccgaattcggcgatgacgacagcgacgatgatgatgataacgatgacatcacc
gctgacttctctgatgacgatgatgacgacagcgattcagatgatgatgacgatagcgac
accaaaaaataa
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