Liberibacter crescens: B488_00750
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Entry
B488_00750 CDS
T02395
Name
(GenBank) Cytoplasmic axial filament protein CafA and Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
lcc
Liberibacter crescens
Pathway
lcc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B488_00750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcc03019
]
B488_00750
03009 Ribosome biogenesis [BR:
lcc03009
]
B488_00750
Enzymes [BR:
lcc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
B488_00750
Messenger RNA biogenesis [BR:
lcc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B488_00750
Ribosome biogenesis [BR:
lcc03009
]
Prokaryotic type
rRNA processing factors
B488_00750
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AGA64068
UniProt:
L0ETV5
LinkDB
All DBs
Position
92204..94756
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AA seq
850 aa
AA seq
DB search
MADKMLIDASHPEETRVVVLRNNRVEELDFETEHKKQIKGNIYLAKVMRVEPSLQAAFVD
YGGNRHGFLAFSEIHPDYYQIPLADRQALLKADAEERESIESELEGAKSEEISGLEGNDT
ESEAVERSTEELCVEAQDPWNQVEKDNQVIFPVESSQLIEVSQENCDEIRVDSFKNEDVM
EEVTENIIKKSRKQYRIQEVIKNRQILLVQIFKEERGNKGAAVTTYLSLAGRYSVLMPNT
ERGEGISRKITNPNDRRHLKEIARGLEIPQGMGIILRTAGASRTKVEIKRDFEYLMRLWE
KVRTLTLNSTAPYLVYEEGNLIRRSIRDLYNKDISEIIVAGQRGYREAKDFMKVLMPSHA
KVVKLYNDVSPIFARSGIEAQLDQLLQAQVILLSGGYIIINQTEALVAIDVNSGRSTKEH
SIENTALQTNLEAAEEIARQLRLRDLAGLIVIDFIDMEEKRNNRNVEKRLKESLKHDRAR
IQIGCISHFGLLEMSRQRIRSSVIESAMQVCDHCAGTGYVRSQSSVALSVLRSIEEYLLQ
NTTHDITVHTKSEVVLYLLNHKRSVIIDYEKRFGVSITIIVGSQLGNQFFLIEKGAAVQN
PVKIEPLVNFENFEDNEDINPDLDEVGENLSDDVHVDNDNVKVLHQRNSSESFSQNGKPS
LEIDGLNAEERKNEEVSDIAVSTPLRRGRRRRSRNGRRRSGQEEKIKVDCDNNNLKINKS
NDINNNVIVRDVFSKSEKNGLISEVVHDDGAELSKGSSQDMFVNESNEKINEIPILYKQD
NSFKIQQESHLKEEKNILRVSEIQKEDVFSEKHSLFEKAIQPIISETSSSIENEKNEEIQ
PKKQSWWKRR
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaaatgcttatcgacgcctctcatcccgaagagacccgcgttgttgtttta
cgaaataatcgtgtagaagaacttgatttcgaaactgagcacaaaaagcaaataaagggt
aatatttatctagcaaaggttatgcgtgttgaaccttctttgcaagctgcttttgttgat
tatggcggtaatcgtcatggattcctggcgttttcagaaattcatcctgattactatcag
attccgcttgctgatagacaggctttattaaaagctgatgcagaagagcgagaaagtatt
gaaagtgaattagaaggtgcgaagtcagaagaaatttctggattagagggtaatgatact
gaatcagaagcagtagaaagaagcacagaggagttatgtgtagaagcacaagatccttgg
aatcaggttgagaaagataatcaagtcatttttcctgttgagtcgagtcaactcattgag
gtttcgcaggagaattgtgatgaaataagagtagactcttttaaaaatgaagatgtcatg
gaagaggtgactgagaacattattaagaagtctcgtaaacaatatcgtattcaagaagtt
attaaaaatcgtcaaattttgttagtacaaatttttaaagaagaacgtggtaataaaggg
gcagctgttacaacttatttatctttggcaggtcgttattctgtacttatgcctaatact
gaacgcggtgaaggtatatcacgtaaaataactaatccaaacgatcgcagacatctcaag
gaaattgcgcgtgggcttgaaattccacagggtatgggtattattttgcgtacagctggt
gctagtcgtactaaagttgaaatcaagcgtgattttgaatatctcatgcgtctttgggaa
aaggtgcgcaccttaactttgaactcaacagcgccatatttggtttatgaagaggggaac
ctcatcagacgctcaattcgagatctttataataaagatatatctgaaattattgtagcg
ggtcaaagaggatatcgtgaagcgaaagactttatgaaagttctcatgccgagtcatgct
aaagtagtgaagctatataatgatgtgagtccaatttttgctcgatctggcattgaagct
cagttagatcagttactacaagcgcaagtaattctcctttctggtggatatattattatt
aatcaaacagaagctttagttgctattgatgttaattctggtcgctccactaaggagcat
tccatagagaacacggctttacaaacgaatttggaagccgcagaagaaattgcacgtcaa
ttacgtcttcgagatttagcaggtttaattgttattgattttattgatatggaagaaaaa
cgtaataaccgtaatgttgagaaaagactcaaggagagtttaaagcatgatagggcgcgt
attcaaataggatgtatatcacattttggccttttagaaatgtctcgtcagcgtattcgt
tcatctgtgatagaaagtgcaatgcaagtttgtgatcattgtgcaggaacggggtatgta
cgatctcaatcttcggtggcgttaagtgtccttcgtagtattgaggagtacttactacaa
aacactactcatgatattacggtacatacaaagtcagaagttgttctttatttgcttaat
cataagcgttctgttattattgattatgaaaagcggtttggtgtttcaataactattata
gtgggttcacaattaggaaatcaattttttcttattgaaaaaggagctgcagttcaaaat
ccagtaaagattgaacctttggtgaattttgaaaactttgaagataatgaggatattaat
cctgatcttgatgaagttggagaaaatttaagtgatgatgttcacgttgataatgacaat
gtaaaagttttacatcaaaggaatagttctgagagttttagtcaaaacgggaagcctagc
cttgaaatagacggattaaatgcagaggaaagaaaaaacgaggaagtctcagatatagcc
gttagtactccattacgaagaggacgacgaaggcgtagtagaaatggaaggcgtcgcagt
ggacaagaagagaaaattaaagtggactgtgataataataatttaaagattaacaagtct
aatgatataaacaataatgttattgtcagggatgtattttctaaatctgaaaaaaatgga
cttatttcggaagtcgttcatgatgatggagctgagttaagtaagggatcttcacaagat
atgtttgttaatgaaagcaatgaaaaaataaacgagattcctatactttataagcaagat
aattcttttaagattcaacaagagtctcacttaaaagaagaaaagaatatattaagagtt
tcagaaatccaaaaagaagatgttttttccgaaaaacattctctctttgaaaaggcaata
cagccaataatatcagaaacttcttctagtattgagaatgaaaaaaatgaagaaattcaa
cccaaaaagcaaagttggtggaagcggcgttag
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