Liberibacter crescens: B488_01680
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Entry
B488_01680 CDS
T02395
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lcc
Liberibacter crescens
Brite
KEGG Orthology (KO) [BR:
lcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcc03016
]
B488_01680
Enzymes [BR:
lcc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
B488_01680
Transfer RNA biogenesis [BR:
lcc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B488_01680
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AGA64161
UniProt:
L0EUV2
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All DBs
Position
complement(201226..202377)
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AA seq
383 aa
AA seq
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MMIITSTLELELACAELTKSNFVTVDTEFLRDVTFWPQLCLIQIATPKMGIIIDPLDSEI
NLSAFFNLMLNPSIVKVFHAARQDIEIIFHMSRQIPTPIFDTQVAAMVCGFRESISYDTL
VRKLLGQQIDKSSRFTNWHQRPLSSKQLDYALADVTYLCEIYTILKAELEQTKRSEWLKE
EMSILENPQTYNLPPEEIWKRIKNRLKKPQELAVLKYITTWREHEARSQNVPRNRIIKDE
TLIEIAQQQPRTSKDIEKLRSIHGSWKHSDQSKKIIEAVNTALALPINEMPQPSYKTPYS
EESTAATELLKVLLKLTCEKNKVAPKLIANGNDLEKIATEGDKANVIALSGWRREIFGEK
ALKMISGHLALGFLNNRIEEIKI
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgatgataattacctcaactcttgagctagaattagcctgtgctgaactcacaaaatcg
aattttgtaacggtagacacagaatttttacgagatgttactttttggccacagttgtgc
ttaatacaaatagccacgccaaagatgggaattattatagacccactagattctgaaatc
aatttaagcgctttttttaatttgatgcttaacccttccatcgtaaaagttttccacgct
gcacgacaagatattgaaattatctttcatatgagtcgtcagattcctacacccattttt
gatactcaagttgctgctatggtttgcggctttagagaatcaatatcgtacgatactctt
gtgagaaagcttctcggccaacagattgacaaatcatcccgatttactaactggcaccaa
agaccattatcttctaaacagctcgattatgcattagcagatgtaacttatctctgtgag
atttataccatcctcaaagctgaattagaacaaaccaaacgaagtgaatggttaaaagaa
gaaatgtctatcttagaaaatcctcaaacttacaatctccctcctgaagaaatatggaaa
cgcattaaaaatcgtctaaaaaaaccacaagaattagctgttttaaaatatatcacaact
tggcgcgaacatgaagcacgatcacaaaacgtacctcgaaatagaattatcaaagatgaa
acccttattgaaattgcacaacaacaaccaagaacgtctaaagatatagaaaaattgcga
tctattcatggtagttggaaacactctgatcaaagcaaaaaaattatagaagcagtcaac
actgcacttgcacttcctataaatgaaatgcctcaaccatcatataaaacaccttattct
gaagaatcaacagcagctactgaacttttaaaagtactcttaaaacttacctgtgaaaaa
aacaaagttgcaccaaaattaattgccaatgggaatgatcttgaaaagattgctacagaa
ggagataaagctaatgttatagctttatctggttggcgacgtgaaatctttggtgagaaa
gcattaaaaatgatatcaggccacttggccttagggtttttaaacaacagaattgaagaa
ataaaaatataa
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