Liberibacter crescens: B488_04040
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Entry
B488_04040 CDS
T02395
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lcc
Liberibacter crescens
Brite
KEGG Orthology (KO) [BR:
lcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcc03032
]
B488_04040
03400 DNA repair and recombination proteins [BR:
lcc03400
]
B488_04040
Enzymes [BR:
lcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
B488_04040
DNA replication proteins [BR:
lcc03032
]
Prokaryotic type
DNA Topoisomerases
B488_04040
DNA repair and recombination proteins [BR:
lcc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B488_04040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
AGA64396
UniProt:
L0EVH2
LinkDB
All DBs
Position
complement(467377..469899)
Genome browser
AA seq
840 aa
AA seq
DB search
MYVVVVESPTKAKTISKYLGSDYKVLSSFGHVRDLPAKNGSVIPQKDFEMTWEVDKSSKK
HMEMIANAVKSSESLILATDPDREGEAISWHVLSLLQNKNITDNKSIKRVVFNAVTKQAV
LDAIKHPRDIDLALVSAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLICNR
ELDIERFIPKEYWLLSVLLETQKGELFEAQLVSVNSKRIEKNSICNQHDANVLTSLLTGA
SYKVEKIEKKPIKRNPSPPFTTSTLQQSASSRLGFSASKSMKIAQKLYEGINLDGETVGL
ITYMRTDGVQIAAEAIEAARHSIKTHFGDQYVPEKPRVYSTKAKNAQEAHEAIRPTDFNR
FPNKIAKFLESDQLRLYELIWKRSIASQMSSAEFERTTITIQAKNNHDDTAILRKSGSTL
CFDGFLASWKDYTDTEKDDDEDTLLPYMKQNEVLLEKKINASQHFTEPPPRYSEASLIKN
LEELGIGRPSTYTAILTTLCDRDYIVIDKRQLLPQNKGRLVTAFLESFFRQYVEYDFTAE
LEEKLDMISSGALNWKDVLREFWQEFIIKIDNTKKLCVSDVIDTLNNLLAPLLFPQKDDV
IDSRKCLACNTGQLSLKLSKYGAFIGCTNYPKCNYTRLFSYENQLLTAPSTTIEPKILGS
DPLTNETITLRSGRFGFYVQRGEEKNKMSRCSLPKSWNANDVDYEKAVALLSLPRSVGTH
PETDKIISTGIGRYGPYLKYDDTYFKLQSIEEVFNISIDDATVIITEKLKQGKKKSRSSA
KKQELGEHPKGGMITLRNGRYGPYINWGKINITLPTEEDVQSINLEHALQLLSQKKTKSK
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtatgttgtagtagtggaatcgcctaccaaagctaaaacaattagcaaatacttggga
tcagattataaagttctatcatctttcgggcatgttcgtgacttacccgctaaaaatgga
tcagtaattccccaaaaagactttgaaatgacctgggaggtagataagtcttctaaaaaa
catatggaaatgatcgccaacgcggtgaagtcttctgagagtttaatcttggcaactgac
cctgatcgagagggagaagctatatcttggcatgtattaagtcttctccagaacaaaaac
attacagataacaaatctattaaaagagttgttttcaatgcggttaccaaacaagcggtt
cttgatgccataaaacatccacgtgatattgatttagcacttgttagtgcctacctggca
cgacgtgcattagattatcttgttggctttaatctttcacctgtattatggcggaaatta
cctggagctcgttcagcaggacgcgtacaatcagtagccttacgactcatttgcaatcga
gaacttgatatcgagcgctttatcccaaaagaatactggcttttatctgtattattggaa
acacaaaaaggtgaattattcgaagcacaattagtaagtgttaatagcaagcgtattgaa
aaaaactctatctgcaatcaacacgatgctaacgttttaacatcgcttctcacaggcgct
tcttataaagtagaaaaaatagaaaagaaacctataaaacgcaaccccagccctcccttt
acaacatctactctgcagcaatcagcctcatctcgattaggcttttctgcttcaaaatct
atgaaaatagcacaaaaactttatgagggaataaaccttgatggagaaactgtaggactc
attacctatatgagaactgatggggtccaaatagccgcagaagcaattgaggctgctcgt
cactctataaaaacacactttggtgatcagtatgttcctgaaaaaccaagagtatattca
actaaagctaaaaacgcacaggaagcgcatgaagcgatacgtcccacagactttaatcgt
tttccaaataaaatagcaaaattcctagaatcagatcaattacgactttatgaattgatt
tggaaacgcagtatagccagtcaaatgtcttcagcagaatttgaacgtaccacaattact
atccaggctaaaaataatcatgatgatacagctattctacgtaaaagtggatctactctg
tgtttcgatggttttcttgcgagctggaaagattatactgatactgaaaaagacgatgat
gaagataccctcttaccttatatgaaacaaaatgaagtcttattggaaaagaaaataaat
gcttcacaacattttacagaaccgccaccacgttattctgaagcttcgctcatcaaaaat
ctagaagaacttggcattgggcgtccatcgacttatacagcaatcttaacaacgctttgt
gatcgtgattatatcgttattgataaacgtcaattattaccacaaaataaaggaagattg
gtaacggcatttctagagagtttctttcgtcaatatgtagaatacgattttacagctgaa
cttgaagaaaaacttgatatgatttcttctggagctttaaattggaaagatgttcttcgt
gaattttggcaagagtttattataaaaattgataacactaaaaagttatgtgtttctgat
gttattgatactttgaataatctgcttgcacctctactctttcctcaaaaagatgacgtc
attgattctcgtaagtgtctcgcttgtaataccggtcaactttcgcttaaattaagcaaa
tatggagcatttattggatgtaccaattatcctaaatgcaattatacacgcctgttttct
tatgaaaaccaactcttaacagctccatcaacaactattgaacccaaaattcttggttca
gatccactaacaaatgaaacgataactctccgttcgggaagatttggcttctatgttcaa
cgcggtgaagaaaaaaacaaaatgagccgttgttctcttccaaagagctggaatgctaac
gatgttgactacgaaaaagctgtcgccctcctatctcttcctcgaagtgtaggaacacat
cctgaaactgataagataatctctactggtatcggcagatacggaccttatctaaagtat
gacgatacttatttcaaattacagtcaatagaagaggtttttaatatcagcattgacgat
gctactgtcattattacagaaaaactaaaacaaggaaaaaagaaaagtcgttcatctgca
aagaaacaagaattaggagaacatcctaaaggaggaatgattaccctacgcaatggacgt
tatggtccttatataaactggggaaaaattaacattaccttgcctacagaagaagatgtg
cagtccattaatctcgagcatgcattacaattactctcacagaaaaaaacaaaatcaaaa
taa
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