Liberibacter crescens: B488_04450
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Entry
B488_04450 CDS
T02395
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lcc
Liberibacter crescens
Pathway
lcc03410
Base excision repair
lcc03430
Mismatch repair
lcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B488_04450
03430 Mismatch repair
B488_04450
03440 Homologous recombination
B488_04450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcc03400
]
B488_04450
DNA repair and recombination proteins [BR:
lcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
B488_04450
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B488_04450
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B488_04450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AGA64437
UniProt:
L0EU01
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All DBs
Position
497210..499009
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AA seq
599 aa
AA seq
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MKEFANSQAFLDVEHSVSGFRWVSLLDQAGVNHALAIAQIHGISDLVARILAGRGVGIEK
AMDFLNPTLRSLMPNPDTLVDCDKAARRIIQAIYQVENIAILGDYDVDGAASVALIARFL
NHFGIKTRIYIPDRILEGYGPNPVIIKKLIDEGAQLIIAVDCGSTSHESLEIAASRNVDV
IVIDHHQVGTEIPCAYALVNPNRQDDLSLQDHLCAAGVVFLVLVLITRILRAEYNIQIKD
LDLLSFLDIVALATVCDAVPLTGLNRAYVRKGIIVARHKGNPGIKALMELMRRPMPITYD
HFGFMIGPRINAGGRIGDSNLGSRLLISDNLSEIETIAAQLDSLNRDRQFMEATMLQQAE
AEVIIKYGDTKGALVIVATGESWHPGIVGLLATRLKDKFGCPAFAIAFDNTTGKGIGSGR
SVIGFDIGIMVRAALEEGLLLKGGGHAMAAGLTVEHSNIDRLRIFFEEYVHNAGINLAAI
KLLKIDGALSAAGATVELFDMLECVGPYGSCNPKPLFVFPRHKLCNFYPIGSSHLKVIFE
NQDSLSIEGIAFYVIDTPLGNFLMKSRGKWMHIAGYLSMDYWKGRKQVQLHIKDAAACI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaatttgccaattcacaagcttttttagatgtagagcattctgtttctggattt
cgttgggtatctcttcttgaccaagctggtgttaatcatgctcttgcaatagctcagatt
catgggatatctgatttggttgctcgtattttagccgggcgtggagttggcattgaaaag
gcaatggattttctaaatcctactcttcgttctttaatgccgaatcctgatacccttgtg
gattgcgataaggcagctcgtcgtattattcaagcgatttatcaggttgaaaatattgct
attttaggcgattatgatgtagatggagctgcttctgtagctttaatagcaagattccta
aaccattttggcattaagactcgtatctatatcccggatcgaattcttgagggatacggc
cctaacccagttatcataaaaaagcttatagatgaaggtgcccaacttattatcgctgtt
gattgtggttctacaagccatgaatctcttgagattgcagcatctcgaaatgttgatgtc
attgtcattgatcatcaccaggtaggaacagagataccttgtgcatatgcattagtcaac
ccaaaccgccaggatgatttatccttacaagatcatttatgtgcagcaggagttgttttt
cttgtgcttgttttaattactcgtattttacgggcagagtataacatacagataaaagat
ttagatttattatcttttctggatattgtagctcttgcaactgtttgtgatgcagtgcct
ttgacaggcttgaatagagcatatgttagaaaaggtattattgttgctcgtcataaaggt
aatcctggtattaaagcattgatggaactgatgagacgtcctatgcctataacatatgat
cactttggttttatgataggtccacgtattaatgctgggggacgtattggagattctaat
cttggaagtcggctattaatatctgataatctttctgaaattgagactattgcggcccag
ttggatagtctcaatcgtgatcgtcagtttatggaagcgactatgttacaacaggctgaa
gctgaagtaatcattaaatatggtgatactaaaggggcgttggtgattgttgctacagga
gagagttggcatcctggaattgtaggattgcttgcaactcgtttaaaagataaatttggc
tgtccagcttttgcgattgcttttgacaatactacaggtaaaggtattggttctggtcgg
tctgtcattggttttgatattggtataatggttcgcgcagctctcgaggaaggtttactt
ctgaaaggtggtggtcatgctatggctgctggtttgaccgtagagcatagcaatattgat
cgattacgtattttttttgaagagtatgtgcacaatgcaggtataaatttagctgcgatt
aaattactgaaaatagatggtgcattaagtgctgcgggggctaccgtagaactttttgat
atgcttgaatgtgttggtccctatggttcatgcaatccaaaacctttatttgttttccct
cgacataagttatgtaacttctatcctataggatcttcacatcttaaagtcatttttgaa
aaccaagattctctttctattgaaggtattgctttttatgttattgacactccgttgggt
aatttccttatgaaatcgcgcggcaagtggatgcatattgctggttatttatctatggat
tattggaaaggcagaaagcaggtacagttacatataaaagatgctgctgcgtgtatatga
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