Liberibacter crescens: B488_05740
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Entry
B488_05740 CDS
T02395
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lcc
Liberibacter crescens
Pathway
lcc03030
DNA replication
lcc03430
Mismatch repair
lcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B488_05740
03430 Mismatch repair
B488_05740
03440 Homologous recombination
B488_05740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcc03032
]
B488_05740
03400 DNA repair and recombination proteins [BR:
lcc03400
]
B488_05740
Enzymes [BR:
lcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B488_05740
DNA replication proteins [BR:
lcc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B488_05740
DNA repair and recombination proteins [BR:
lcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B488_05740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
TerB_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AGA64566
UniProt:
L0EW20
LinkDB
All DBs
Position
626433..629942
Genome browser
AA seq
1169 aa
AA seq
DB search
MKKQVVIPKNINLCSEYTSPEFIHLRVHSAYSLLEGALPLEKILEQAVEDQQPAIAVTDT
NNLFAAMEFSQVAFAYGVQPLIGCQIDLDIQDKFEEERHKKSSLVQFPSIVLFAANEQGN
EHLVDLVSRMYLQKQEQKAIHVCCSWLEEQGTEGLIALTGSVTGPVDMALKEGHAHIAEE
RLLILQKLFGDRLYLELQRHGNYDRYHEAKMVKLAYDYDIPLVATNNAFFLSRDDYEAHD
VLMAVAYSTVVAEDDRPRMTPEHYLKRRSEMVRLFSDLPEALENTVEVARRCSFVLETRA
PILPRFLETGKGGTSVEEAEAQELYTQAVEGLETRLSCSGMSAGYSKEEYSKRLTFELDV
IQKMKFSGYFLIVADFIKWAKKHEIPVGPGRGSGAGSLVAYALTITDVDPLRFALFFERF
LNPDRMSMPDFDIDFCQDRRDEVIRYVQEKYGHEQVAQIITFGSLQARAALRDVGRALQM
PYSQVDRICKLVPNNPAHPMPLAKVIVEEPRLQQEMEKEPGVARLLEVAQKLEGLYRHAS
THAAGIVIGDRPLSRLVPMYLDPRSQMPVTQFNMKWVEKAGLVKFDFLGLKTLTVLKKAI
DLVARKGIHVDLLTIPFDDQKTYQLLARGETVGVFQVESSGMRKALMGMNPDCIEDIIAL
VSLYRPGPMDNIAVYNSRKNGLDTIDSIHPLIDPLLKETQGVIIYQEQVMQIAQSLSGYS
LSEADVLRRAMGKKIKKEMDQQQARFISGAMKNNVSRQQALNIFELLAKFANYGFNKSHA
AAYAIISYQTAWMKAHYPVEFLAASMTMDMGNIEKINDFLQDAARMGIKVIPPSLQTSFR
EFETGQDCIYYSLAAIKGIGSAVVEHIVTVRGNKPFESLEDFCLRISAKQLNRRMLENLI
VAGAFDCFGHNREQLVAAVDRIHGYALRAEEDRISGQGDIFTAKNVVVEKISLPSVQSWL
LSEHAHREFQVLGFYLTSHPLEIYQPILAKMHVQTFESFNNALKKGIRVGQLGATVVAKK
QKKSRKGNKLGLVSFSDLHNQFETVLFAEAFEKYYDLLEIGQSFFITLEVDPRFEMGGLR
LQVAQSLEKKSMQMLKAIKIRIRDRAVLNNIQKYLQEGERGQSSVFLLFKKPQYYCEVEI
VLPNKYRVSPEIIWAIQKLEGIVDVIQIL
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaagtggttattccaaagaatatcaatttgtgttcagagtatacctctcca
gagtttatccatttacgggttcattcagcctattctttgttagaaggcgctttacctctt
gaaaaaattcttgaacaggctgttgaagaccaacagcctgcaattgctgttacagatacc
aacaatctttttgctgccatggaattttcacaggtagcatttgcatacggagtacagcca
ttaatagggtgtcaaattgatctggatatacaagataaattcgaagaagaacgtcacaaa
aaatcttctctcgttcagtttccatctattgtgctgttcgcagccaatgagcaaggtaat
gaacacctggtcgatttagtgagtcgaatgtatcttcaaaaacaggaacagaaagctatt
catgtatgctgctcctggttagaggaacagggtacagaagggcttattgccttgacgggt
tctgttactggtcctgtagatatggctttaaaggagggtcatgctcatatagcagaagaa
cgattactgatattgcagaagcttttcggtgatcgtttgtatttagaattacaacgccat
ggaaattatgatcgttatcatgaagcaaaaatggtgaagctggcatatgactatgatata
ccactagtagcaacaaataatgctttttttctatcccgtgatgattatgaagcgcatgat
gttctgatggctgttgcctattcaacagttgttgcagaagatgatcgtccgcgaatgact
cctgaacattatctgaagcggcgctctgaaatggtgagacttttttctgatcttcctgaa
gcattagaaaataccgtagaagttgcaagacgttgttcatttgttttagaaacgcgcgca
cctattttgccacgttttttagagacaggtaagggggggacgagtgttgaagaagcagaa
gcacaagaattatatacgcaagctgttgaaggattagagacacgtttatcctgttcaggg
atgtctgcaggttattccaaagaagaatattcaaaacggttaacttttgaacttgatgtt
atccagaaaatgaaattttctggatattttttgattgtggcagattttattaaatgggca
aaaaaacatgaaattcctgtagggccaggacgtggttccggggcaggatctctcgtagca
tatgctttgacaataactgatgttgatcctttgcgttttgctttattttttgagcgattt
ttgaatccagatcgtatgtctatgcctgattttgatattgatttttgtcaggatcgtcgt
gatgaggttattcgctatgttcaggagaaatatggtcatgaacaggttgcccagattatt
acttttggatcattgcaggctagggcagccttgcgtgatgttgggcgtgcgttacagatg
ccgtattcacaggttgatcgtatctgcaagttggtacctaataatccagctcacccaatg
ccgttggctaaggttattgttgaggaaccacgtttacaacaggagatggaaaaagaaccc
ggcgtagcgcggcttctcgaagttgcccagaaacttgaaggattatatcgccatgcttca
actcatgctgcaggtattgtgattggtgatcgtcccttatcaagattggtgcccatgtac
cttgatccgcgttcccagatgccagtgacgcaatttaatatgaagtgggttgaaaaagca
ggacttgtcaaattcgattttctgggtttgaaaacattaacagtgcttaaaaaagcgatt
gatcttgtagcccggaagggcatccatgttgatttgttaacgattccttttgatgaccag
aagacttatcaactattggcacgtggtgaaactgtgggtgtattccaggtggaaagttct
ggtatgcgcaaggcattgatgggaatgaatccagattgtattgaagatattattgcacta
gtttccttgtaccggcctggtccgatggataatattgctgtttataattctcgtaaaaat
ggtcttgatacaatagattctattcatccattaattgaccccttgctcaaggaaacccaa
ggcgtgatcatttatcaggaacaagtgatgcagattgcccagtctctttcaggctattca
ttgagtgaggctgatgttttgcggcgagccatgggtaagaaaattaagaaagagatggat
caacagcaggcacgttttattagtggggcaatgaaaaacaatgtttccagacaacaggcc
ttaaacatttttgaattattagccaaatttgctaattatggttttaataaatcacatgct
gcagcgtatgcaattatttcctatcagaccgcctggatgaaagcacattatcctgttgag
tttttggcagcgtcgatgaccatggatatgggaaatattgaaaaaatcaatgatttcttg
caagatgcagcacgcatgggaattaaggttattccaccttctttacagacttcattcagg
gaatttgaaacaggccaagattgtatttattattctttggcagccattaaaggaataggg
agcgcagttgttgagcatattgttacagtcagaggtaacaagccttttgaaagcttagag
gatttttgtcttagaattagtgccaaacaattaaatcgccggatgttggagaatcttatt
gttgcgggtgcttttgattgttttggacataatcgtgagcagcttgttgctgccgtggac
cgtattcatgggtatgcattacgtgctgaagaagatcggatcagtggtcagggagatatt
tttactgctaaaaatgttgttgtcgaaaagatctcgttgccatctgttcagtcttggctt
ctttctgaacatgcgcatcgtgaatttcaggttcttggtttttatttgacgtcacatcct
ttagaaatttatcaaccgatactcgccaaaatgcatgttcagacttttgaaagttttaat
aatgctctcaaaaagggtattcgtgttgggcaactaggtgcaacagttgtcgccaaaaaa
caaaagaaaagccgcaaaggaaataaattgggtcttgtctctttttctgacctccataat
cagtttgagacggttttattcgcagaagcttttgagaaatattatgatctgttagagata
ggccaatccttctttattacattagaagtagatccacgttttgaaatgggagggcttcga
ttacaggtcgctcagtcgctagaaaaaaagtctatgcaaatgctcaaagcaattaaaatc
cgcattcgggatcgagcagtactcaataatattcagaaatatctacaggaaggagaaaga
ggacaaagctctgtctttttattatttaaaaaaccgcaatattattgtgaagtggagata
gtcttgccaaataagtatagggtttctcctgaaattatctgggctatacagaagctggag
gggattgttgatgtcattcagatcctgtaa
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