Liberibacter crescens: B488_08250
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Entry
B488_08250 CDS
T02395
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lcc
Liberibacter crescens
Pathway
lcc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B488_08250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcc03400
]
B488_08250
DNA repair and recombination proteins [BR:
lcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B488_08250
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B488_08250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_7
Microtub_bd
Kinesin
TrwB_AAD_bind
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
AGA64817
UniProt:
L0EV26
LinkDB
All DBs
Position
898027..900336
Genome browser
AA seq
769 aa
AA seq
DB search
MNEIRSIAAKHRKNAAFKKRQDTQSKETSVQSLMDPMLRVASGLNPVAGMNTSLEETSRL
DLKTEMTATVKALSALIESDNPLLKNGILWVPHRPHRQGQKSEGGIPLRMHTHYKPSGDQ
PTAIESLVKGIASEKRDQLLLGVTGSGKTFTMAKVIEETQRPAVIMAPNKILAAQLYSEF
KNFFPNNAVEYFVSYYDYYQPEAYVPRTDTYIAKESSINEQIDRMRHSATRSLLERDDCI
VIASVSCIYGIGSVEAYTAMTLHIKVGDLLEQGQLLSDLVAQQYKRQEMHFSRGSFRVRG
DTIEIFPSHLENAAWRISMFGDEIEELMEFDPLTGKKTRDLQSIKIYANSHHITPKPTLH
EAMKHIKEELKHRINELEQAGRLLEAQRLEQRISYDLEMLETTGSCQGIENYSRYFTGRH
PGEPPPTLFEYIPENALLFVDESHVTIPQINGMYRGDFRRKATLAEYGFRLPSCIDNRPL
RFEEWNAMRPTTITVSATPGQWELNQCQHRFIEQVIRPTGLVDPPVEIRPARNQVDDILY
ETQKTTAKGYRSLLTVLTKRMAEDLTEYLHERNIKVRYMHSEINTLERIEIIRDLRLGTF
DVLVGINLLREGLDIPECGLVGILDADKEGFLRSETSLIQTIGRAARNIESHVILYADKV
TRSIQRAVNETMRRREKQISYNQQQNIQPESVKAKISDILESLYKNDDPVFGNAKKYEVG
FSEETKPVIKDIKNHLKKLRKQMQEASSNLNFEEAARIRDEIKKFKTIE
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaattcgttctattgcagcaaaacaccgcaaaaatgcagcttttaaaaagcgt
caggatactcaatcaaaagaaacatccgtacaaagtctgatggatccaatgctacgggtc
gcttctggtcttaatcctgtagcaggaatgaatacttctttggaagaaacatcccgactt
gatctcaagactgaaatgacggcgaccgtaaaagcgctttctgctctgatcgagtcagat
aaccctcttttaaagaatggcatattatgggttccccatcgacctcatcgtcaaggacaa
aaatcagaaggcgggattccactgcgtatgcatacccattacaaaccttcaggagatcag
ccaacagccattgaaagtcttgtaaagggtatcgcttcagaaaaacgggatcaactcctt
ttgggcgtaacgggttcaggaaaaacattcacgatggctaaagtgattgaagaaacacaa
cgtccagctgttattatggctcccaataaaattctagctgcccagctttattcagaattt
aaaaacttttttccgaataatgctgtagaatattttgtatcctactatgactattaccaa
ccagaagcttatgttcctcgtacagacacttatattgcaaaagaatcctccattaacgaa
cagattgatcgcatgcgacattctgcaacacgttctctccttgaacgggatgactgtatt
gttattgcttccgtttcctgcatatacggcataggttctgttgaagcatatactgcaatg
accctgcatataaaagttggagatttactggagcaaggtcagcttctttctgatcttgta
gcgcaacaatataaacgtcaggagatgcatttttccagaggttctttccgggtgcgtggc
gataccattgagatattcccttcgcatctcgaaaatgctgcatggagaataagcatgttt
ggcgatgagattgaagaactgatggaatttgatccactgacagggaaaaaaacaagagat
ctgcaatccattaaaatatatgccaactctcatcatattactccaaaacccactcttcat
gaagcaatgaaacatattaaagaagagctcaaacaccgcatcaatgaactcgaacaggca
ggacggcttctggaagcacaacgtcttgaacaacgtatctcctatgacctggagatgctg
gaaacaacaggctcctgtcaaggcattgaaaattattcgcgttattttacgggtcgtcat
cctggtgaacctccaccaactcttttcgaatatattcctgaaaatgcattgttatttgtt
gatgaaagtcatgtcacaatcccgcaaattaatggtatgtatcgaggtgactttagacgt
aaagcaactttagctgaatatggcttccgtctcccttcctgtattgataaccgtccctta
cgatttgaagagtggaatgcaatgcgtccaacaactataacggtatcagccacacctggt
caatgggaattgaatcaatgtcagcatcgctttattgaacaagttattcgtccaacaggt
cttgttgaccctccagtggaaataagacctgcccgaaatcaggtcgatgatattctttat
gaaacacagaaaacaacagcaaaaggctatcgcagtcttttgaccgtattaaccaaacgt
atggcagaagatcttaccgagtatttgcatgaacggaatatcaaggtacgatatatgcat
tctgaaattaatactttagagcgtattgagattatccgtgatcttcgtcttggtacattt
gatgtactggtcggtattaatcttttacgagaaggccttgatatccctgaatgtggtctt
gttggcatccttgatgcagataaagaaggatttttacgttcagaaacgtctttaattcaa
acaatcggccgtgctgcccgtaatatcgagagtcatgtcattctttatgccgacaaggta
acacgatctattcaacgtgccgtcaatgaaaccatgagacgtcgtgaaaaacagatatcc
tataatcaacaacagaatatacaaccagagtcagtaaaagcaaaaatttcggatatactg
gaatcgctgtacaaaaatgatgatccggtttttggtaatgcaaagaagtacgaggttggc
ttttcagaagaaacgaaacctgtgataaaagatataaaaaatcatttaaaaaaattgagg
aaacaaatgcaagaagcatcgagcaatcttaattttgaagaagcggcccgaataagggat
gaaatcaaaaaattcaaaaccattgaataa
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