Liberibacter crescens: B488_08400
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Entry
B488_08400 CDS
T02395
Name
(GenBank) Uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lcc
Liberibacter crescens
Pathway
lcc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B488_08400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcc03400
]
B488_08400
Enzymes [BR:
lcc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
B488_08400
DNA repair and recombination proteins [BR:
lcc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B488_08400
Prokaryotic type
B488_08400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGA64832
UniProt:
L0EV42
LinkDB
All DBs
Position
complement(916805..917518)
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AA seq
237 aa
AA seq
DB search
MNDIILHESWKLPLLDEFCSSYMQDLKDFLLSEKKKGKRIFPKGSEYFRALDLTPLSRIS
VVILGQDPYHAYGQAHGLCFSVLPGIRLPPSLINIYKELKEDLQIIPPLHGFLESWARQG
VLLLNSVLTVEEGRAASHQGKGWERFTDAVIRIINNQCEHVVFMLWGSYAQKKGEFLDKR
RHYVLKAAHPSPLSAHNGFFGCRHFSKANEYLQAHDRVPIDWYIGPVTAHGAYQSDE
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacattatactgcatgagagctggaagttaccacttttagatgagttttgtagc
agttacatgcaagatcttaaagattttcttctttctgaaaagaaaaaaggaaagagaatt
tttccaaaaggatcagagtattttcgtgctttggatcttactcctttatcaaggatttct
gtcgttattcttggacaagatccatatcatgcttatggtcaggctcatggtctctgtttt
agtgttcttccagggatccgtcttcctccttcccttatcaatatttacaaagaacttaaa
gaagatttacaaattatacctcctttgcacggatttttagagtcttgggccaggcaaggt
gttcttttattaaacagtgttcttactgttgaggaaggacgtgctgcttctcatcaagga
aaaggatgggagcgttttacagatgctgttatccgtataatcaataatcaatgtgagcat
gttgtttttatgttatggggttcttatgctcagaagaaaggagaatttctggataaacgt
cggcattatgttctcaaggctgcacatccgtctcctttatctgctcataatggttttttt
ggatgccgccatttttctaaagccaatgaatatcttcaggctcatgatcgcgttcctatt
gattggtatataggacctgtcacggctcatggagcttatcaatctgatgaataa
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