Liberibacter crescens: B488_11900
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Entry
B488_11900 CDS
T02395
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lcc
Liberibacter crescens
Pathway
lcc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B488_11900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcc03400
]
B488_11900
Enzymes [BR:
lcc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
B488_11900
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B488_11900
DNA repair and recombination proteins [BR:
lcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B488_11900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AGA65182
UniProt:
L0EW45
LinkDB
All DBs
Position
1299840..1300715
Genome browser
AA seq
291 aa
AA seq
DB search
MPELPEVETIRRGLLTFMVGMTITNLEIRCTHLRYAFPINFSERVKNKKIINISRRAKYL
LINLEQNLSIVIHFGMSGSFIVEKDGLEKTDQTRAKNSKHDHVILYLEKEALLYRVIYND
PRRFGFMDLVVSSLVNEYPSFVNLGPEPLEDSFNVFHLEKYFTGRKGKLKTALLNQKLVA
GLGNIYVCEALWRAGLSPMRTMKTLVNNNTTPDSKLFILQKAIHNVISEAIEAGGSSLRD
YIQVNGSLGSFQNCFYVYNREGKPCLSNCGTLIRRTMQAGRSTFYCEVCQN
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgccagaagttgaaacaataagacgtggccttcttaccttcatggtaggc
atgactataactaacctagaaatacgctgtacccatctacggtatgcttttcctattaat
ttttctgaacgcgttaaaaataagaaaattataaatatctctcgtcgagcaaaatattta
ttaattaatcttgagcagaacctatcaatcgttatacacttcggtatgtctggatctttt
attgttgaaaaagatggcttagaaaaaactgatcagacacgtgcaaaaaactccaagcat
gatcacgttatactgtatcttgaaaaggaagcattgctgtaccgtgttatatacaacgat
ccacgtcgctttggattcatggatctagtagttagctccttagtgaatgaatatccttcc
tttgtaaatctaggaccagaaccactcgaggattcttttaatgttttccatttagaaaaa
tattttacaggtcgaaaaggaaaattaaaaaccgcattactcaatcaaaaattggtcgct
ggactaggcaacatttatgtttgcgaagctctatggcgtgcaggtttatcacctatgcgg
acaatgaagacattagttaataacaatacaacgccagattctaagttgttcatattgcaa
aaagcaattcataatgtaatttctgaagcaatcgaagctggaggatcatctttacgtgac
tatatacaagtcaatggctcactaggttcatttcaaaattgtttttatgtctataaccga
gagggaaaaccttgtctatcaaattgcggaacgttaatacgtcgtactatgcaagcagga
cgttcaactttttactgtgaagtatgtcaaaattga
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