Legionella clemsonensis: clem_04015
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Entry
clem_04015 CDS
T05016
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lcd
Legionella clemsonensis
Pathway
lcd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
clem_04015 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcd03019
]
clem_04015 (rhlE)
Enzymes [BR:
lcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
clem_04015 (rhlE)
Messenger RNA biogenesis [BR:
lcd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
clem_04015 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25_NTPase-like
Cas3-like_C_2
ERCC3_RAD25_C
UvrD-helicase
Gag_p24
Flavi_DEAD
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ASQ45361
UniProt:
A0A222P0L3
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All DBs
Position
922196..923443
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AA seq
415 aa
AA seq
DB search
MNFTSLGLIEPLVRAVNELGYLEPSPIQIQAIPAILGGKDVLASAQTGTGKTAGFVLPIL
QNLKDKPRAGNNRARVLILTPTRELAAQVHESIVQYGCHLTLRSAVVFGGVKINPQMMKL
RGGVELLVATPGRLLDLHQQRAIQLDTIDTLVLDEADRMLDMGFIHDIKRIMKLLPTNRQ
TLLFSATFSEEIRVLVKNILKQPLEIDVNPRNTTAVAVKQTVHPVDKGRKSALLSHLIHT
NKLGQTLVFSRTKHGANKLVKQLAQDNIHAAAIHGNKSQSQRTKALAEFKSGKLHILVAT
DIAARGIDIDQLPCVINFDLPQVAEDYVHRIGRTGRAGASGQAISLVSADEVGQLNAIER
LIKRKLNRVDIEEFEPNHHVPHGLSPAQTKKALPQRKKASVSSKTTQKQRFGRRN
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaattttacatcactgggtttaatagagcccttggttcgtgccgttaacgaattaggt
tatcttgagccctcgcccattcaaattcaagctatccctgccattttaggtggtaaggat
gtgctagcctcagctcagacaggaacgggtaaaaccgcgggttttgtattgcccattcta
caaaatttaaaagataaaccccgtgctggaaataatcgagctcgagttttaatccttact
ccaacccgtgaattagctgctcaagtccatgaaagcattgttcaatatggatgccatttg
acgctgcgttctgctgttgtttttggtggagtaaaaattaacccacaaatgatgaaattg
cgcggaggtgtagagttattagtagcaacacctggacgactgttggatttacaccaacag
cgagctattcagcttgatacaatagataccttagttttagacgaagcagatcggatgctg
gatatgggcttcattcatgacataaagcggattatgaagttattgcctacaaatcggcaa
actctcctattttctgcaactttctctgaagaaattcgagtccttgttaaaaatatatta
aagcaacccttagaaattgacgtaaacccacgtaacacgactgcggttgctgtaaaacaa
acggttcatccagtggataaaggtcgcaagtcggctttactgagccatttaattcatacc
aataaattgggccaaacactggtattttctcgcaccaaacatggagccaacaaattagta
aaacaattagcacaagacaatattcatgccgcagccattcatggtaataaatcgcagtca
cagcgcaccaaagccctggctgaatttaaatcgggcaagttacatattttagttgcaacc
gacattgcagcccgtggtattgatattgatcaacttccctgtgttatcaattttgatctt
ccccaggttgcagaagattatgtgcaccgtattggccgcacaggtcgagcgggtgcttca
gggcaggcaatttctttagtgagtgcagatgaggtgggtcaactaaatgccattgaacga
ttgatcaagcgcaaattgaatagagtcgacattgaagagtttgaacctaatcatcatgtc
cctcatggtctatcacctgctcaaactaaaaaagcccttcctcaaagaaagaaagcatct
gtcagttcaaaaaccactcagaagcaacgttttggcagacgtaactaa
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