Legionella clemsonensis: clem_06215
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Entry
clem_06215 CDS
T05016
Symbol
spoVD
Name
(GenBank) Stage V sporulation protein D
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
lcd
Legionella clemsonensis
Pathway
lcd00550
Peptidoglycan biosynthesis
lcd01100
Metabolic pathways
lcd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
lcd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
clem_06215 (spoVD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
clem_06215 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lcd01011
]
clem_06215 (spoVD)
Enzymes [BR:
lcd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
clem_06215 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
lcd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
clem_06215 (spoVD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ASQ45798
UniProt:
A0A222P1Q2
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All DBs
Position
complement(1409458..1411311)
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AA seq
617 aa
AA seq
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MRLNKSVKNDRRDAQLQCFRLNLLLILMILLSFILFARLAYLQVSQFKRYQTLSLKNQMN
VIPIAPPRGIILDRNGIVLAENIPVYVLEIIPERVKNMTQTLEKLKNLLPSITEEDIDNF
HKTRKQNRSFVPIPLKLKLSQEEVAVFASNQYQFPGVNIKARLMRFYPLGEVAAHILGYV
GRINVQELRQVDFTNYRATNFIGKSGIEKFYEDILHGEVGYQQVEIDVSGRTVRVLNKKN
PVSGEKLYLTIDSRLQQAAFEALKDKRGAVVAINTKNGEILAMVSSPSYNPNIFVNGITA
KEYQELVTAHDRPLYNRAVRGLYPPASTIKPFMGLAGLEKGAVDARYSIYDPGWFRLPGV
SHAYRDWKKTGHGIINLKRAITVSCDTYFYQLGHKIGIAAIEDMLVQFGFGQLTHIDLNE
EAPGLVPNKHWKLQNKGVSWYPGDTVITSIGQGFMLATPLQLANATASLSQKGKRFRPHL
LQKAVQSDDGKIEEYKILEEYPMHLKDDNYWTTVAEGMLAVITSNEGTGYRFGRTAPYSV
AAKTGTAQVFGGRQYDKVRYEEIPEYLRDNSLFIAFAPYEEPEIALAVVVENDFAASNVA
RKVLDAYFELKKNEEKS
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttaaataaatctgtaaaaaatgatcggagggacgctcagctacaatgctttcga
ttaaatttgctgttaattcttatgattttattatcatttatcctctttgctcgcctcgct
tacttacaagtttctcaattcaaacgctatcagactctgtctctaaaaaatcaaatgaat
gtaattcctattgctcctccgaggggcattatccttgatagaaacggcattgttttagca
gaaaatattcccgtctatgtgttggaaattattccggaacgcgttaaaaacatgacacag
acattggaaaaacttaagaatttacttccttccattactgaagaagatattgataatttt
cacaagacgcgaaaacaaaatcgctcctttgttcccattcctttaaaacttaaattaagt
caggaagaagtcgctgtttttgcaagtaatcaataccaatttcccggggtcaatatcaaa
gcaagacttatgcgtttttatcctttaggtgaagtagcagcgcatattttaggctatgta
ggacgcattaatgtgcaagaattgcgtcaggtagatttcaccaattatcgcgcgaccaat
tttattggcaaatcaggtattgaaaaattttatgaagacatattacatggtgaggtgggc
taccaacaggttgaaattgatgtaagtggtagaacggtgcgtgttttaaataaaaaaaat
ccggtctctggtgaaaaactatatctaactatcgactcgcgtttacaacaggcagctttt
gaggcattgaaagacaaacggggcgctgttgttgctatcaacaccaaaaacggtgaaatt
ctcgctatggtcagctctcccagctataatcccaatattttcgtcaatggaataaccgcc
aaagaatatcaagaattggtaacagcacacgaccgccctctttataatcgagcagtaaga
ggattatatcctccagcctcaaccattaaaccatttatggggttggcgggtttagaaaaa
ggagcagtggatgcccgttatagtatttatgatccaggttggttccgattgcctggggtt
agtcatgcttatcgtgattggaaaaaaacggggcacggtatcattaaccttaagcgagca
ataaccgtttcttgtgatacttatttctaccagcttgggcataaaataggtatcgctgct
attgaagatatgcttgtacaatttggctttggccaattaacacacatcgatttaaatgag
gaagcaccgggattagtacctaataaacattggaaattgcaaaacaagggggtttcctgg
tatccgggcgataccgtcatcacctcaattggacaagggtttatgttagccacccccttg
caactagctaacgcaacagcttctttaagtcagaaaggcaaacgctttcgacctcacttg
ttacagaaagcagttcagagcgatgatggcaaaattgaggaatataaaattcttgaagaa
tatcccatgcatcttaaggatgacaattattggaccactgttgctgagggtatgctggct
gtaattacaagcaatgaaggaacgggttatcgttttggtcgtactgcaccctattctgtc
gccgctaaaacaggaacggctcaagtcttcggtggacgtcaatatgacaaagttcgctat
gaagagattcctgaatatttaagagacaactcattattcattgcctttgctccctatgaa
gagccagaaattgcattggctgtagttgttgaaaatgattttgctgcctcgaatgttgca
cgcaaagtgttggatgcttattttgaattgaagaaaaatgaagagaaatcatga
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