Legionella clemsonensis: clem_06340
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Entry
clem_06340 CDS
T05016
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lcd
Legionella clemsonensis
Pathway
lcd03030
DNA replication
lcd03430
Mismatch repair
lcd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
clem_06340 (holB)
03430 Mismatch repair
clem_06340 (holB)
03440 Homologous recombination
clem_06340 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcd03032
]
clem_06340 (holB)
03400 DNA repair and recombination proteins [BR:
lcd03400
]
clem_06340 (holB)
Enzymes [BR:
lcd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
clem_06340 (holB)
DNA replication proteins [BR:
lcd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
clem_06340 (holB)
DNA repair and recombination proteins [BR:
lcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
clem_06340 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
Motif
Other DBs
NCBI-ProteinID:
ASQ45823
UniProt:
A0A222P1V5
LinkDB
All DBs
Position
1432708..1433631
Genome browser
AA seq
307 aa
AA seq
DB search
MQVFNSSEVDSPLAFWWEQFRTIYERQYLPHALLLIGPQHAGLIAFSYKMASVVLCSQDN
KPCGKCKSCRLLQAKEHPDVTQLQPEKVGGVIKIDQIRDLQTVAFTSPQLGGKRIIIIHP
AEKMNVAAANALLKLLEEPPSCLLFILIAEQVSTVLPTILSRCQQWRFSNNESTSIDDLT
IGEHYHSESERGKIFSYLTTILQDLLDLKNRTTSVCKIATKWLTYEFNELIWLLYLLNSQ
LIQTRLAGSLPEKSWSSQVYQLSQCFHPVCLFHQLDELNHITKKLNQNISINQTLVLEHL
LLGYTQC
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgtttaactcttcggaagtagattcgcctctcgcgttttggtgggagcaattt
cgtactatttatgaaagacaatatttaccgcatgcgcttttattaattggtccacagcat
gcaggtttaattgctttttcttacaagatggcgtctgttgtattgtgttctcaagataat
aaaccttgtggaaaatgcaaatcctgtcgcttgctgcaggcaaaagagcatcccgatgtc
actcaattgcagcctgaaaaagtaggcggtgtgattaaaattgatcaaatccgtgatcta
caaacggtagcgtttacctcacctcagttaggtggcaaaaggataattattatccatccc
gccgagaaaatgaatgttgctgcggcaaatgctttattaaaactgttagaagagccgcct
tcttgtttgctttttatattaattgctgagcaagttagtacggtattgcccactatatta
agtcgttgccaacagtggcgattttccaataatgaaagcaccagtatagatgacctgact
ataggcgaacattatcactctgaaagtgaacgaggaaaaatttttagctaccttacgaca
atactgcaagatttattggatttgaaaaatagaacaacttccgtctgtaagatagctact
aaatggctaacgtatgaatttaatgagttaatctggctgctttatttgctaaattctcag
cttattcagacgcgattggctggaagtttgcccgagaaaagttggtcttcacaagtttat
cagctctcccaatgctttcatcctgtttgtctgtttcatcagctcgacgaactgaaccac
ataacaaaaaagttgaaccaaaacattagcattaatcaaaccctggtgttggagcatttg
ttattggggtatacgcagtgctaa
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