Legionella clemsonensis: clem_12055
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Entry
clem_12055 CDS
T05016
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
lcd
Legionella clemsonensis
Pathway
lcd02020
Two-component system
lcd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lcd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
clem_12055 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
clem_12055 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcd03021
]
clem_12055 (rpoN)
Transcription machinery [BR:
lcd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
clem_12055 (rpoN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
LacI
Period_C
Frankia_peptide
Motif
Other DBs
NCBI-ProteinID:
ASQ46947
UniProt:
A0A222P551
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All DBs
Position
2699823..2701217
Genome browser
AA seq
464 aa
AA seq
DB search
MKPSLQLNISQQLTLTPQLQQAIRLLQLSTLDLQQEIQQVVESNPMLEVISNEEKEEPRE
EIKQNTDEFTDFQWAQLYSNSNKRNNFDDLDFNYENLYCTTTNLQDHLRWQLDLTPMSDV
DRVIATAIIDALDDDGFLTLPLAELHASLDSEAHPLDLEEIEAVLHRVQHFDPVGCAAVN
LAETLLIQLDQLPDHNGDIALAKQIIRDDIELLGQHNYRQLMKSYQINEATLDRVLQIIQ
RLNPKPGSLIQQSTTEYIIPDVIVKKIEGIWEVALNQNTLPRLSINTHYASLIQRADNSA
DNQFLKNNLQEARWFLKSIQSRQETLLKVAQCIVEYQQDFLEHGEEAMKPLILNDVALAL
DMHESTISRVTTQKFMHTPRGVFELKYFFSSHVATVTGGECSSTAIRAVIKKLIAAENRK
KPLSDSKIAQLIGAQGIQVARRTVAKYREAMGIPPSNERKTIRN
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatcgttgcagttaaatatcagtcaacaattaacacttaccccccaacttcag
caggctattcgtcttcttcaattatctacacttgacttacaacaagagattcaacaagtt
gtcgaatcaaatcccatgcttgaggtaatatcgaatgaagaaaaagaagagcctcgagag
gaaataaaacaaaacacagacgaatttactgactttcaatgggctcaactctactccaat
tcaaataagagaaacaattttgatgacttggactttaattatgaaaatttgtattgcacc
acaacaaacttgcaagaccatctacgctggcaacttgatttaacacccatgagcgatgtc
gatcgcgttattgcaactgctatcattgatgctcttgatgacgatggtttcctaacttta
ccgcttgcagaattgcacgctagtcttgatagtgaggcacaccctcttgatctggaagaa
attgaggcggtgctccatcgtgtacagcattttgatccggttggttgtgccgctgttaat
ttggctgaaacccttctgatacagcttgatcaattacctgatcataatggcgatattgct
ttagcaaaacaaatcattcgtgacgatattgaactgcttggacaacacaattatcgacaa
ctgatgaaaagttatcagattaatgaagctactcttgatagagtacttcaaattattcaa
cgtctgaatcccaaaccaggaagtttaattcagcaaagcactacggaatacattattcca
gatgtgattgtgaaaaaaatagaaggtatttgggaagtggccttaaatcagaatactctt
ccgcgcttaagcatcaacactcactacgcctcacttattcaacgagcagacaacagcgcc
gataatcaatttctgaaaaataacctccaagaagcacgctggtttctaaagagcatccaa
agtcgacaggaaacacttttaaaagtggctcaatgcattgttgaatatcagcaagatttt
ctggaacatggcgaggaagcaatgaaacctctcatcttaaacgatgtagctcttgctctt
gacatgcatgaatccaccatctctcgtgttaccacgcaaaaatttatgcatacgccaaga
ggagtctttgagttaaaatactttttctccagccatgtagcgacagtcacaggtggagaa
tgttcatcaactgcgattcgggcagtgattaaaaaactaattgctgctgaaaatcgcaaa
aagcccttgagtgatagtaaaattgcacagttaattggagcgcaaggcattcaagttgca
agaaggacagtagccaaatatcgagaagccatggggattccgccatccaatgagcgcaaa
accattcgtaattag
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