Lacticaseibacillus paracasei LC2W: LC2W_1003
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Entry
LC2W_1003 CDS
T01956
Name
(GenBank) Uncharacterized RNA pseudouridine synthase yhcT
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lce
Lacticaseibacillus paracasei LC2W
Brite
KEGG Orthology (KO) [BR:
lce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lce03009
]
LC2W_1003
Enzymes [BR:
lce01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LC2W_1003
Ribosome biogenesis [BR:
lce03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LC2W_1003
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Herpes_heli_pri
Motif
Other DBs
NCBI-ProteinID:
AEA53337
UniProt:
A0A1S2ASB3
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All DBs
Position
979281..980183
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AA seq
300 aa
AA seq
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MRFEWQYEGPPLKLAAFLKQQGFSRAQLKKLRYQGGFVFVNKRQRHTAYPVRSGDRILVQ
TAPEHAADSVVPYSHDLAISYEDDDYLIVNKPAGVASIPAVGRQNNSMANMVKAYLIKTK
AESQAVHVVTRLDRDTSGLMVFAKHGLAHSLLDQQLHSQDFVKQYVAIVTAQTPLATHGW
IVLPIGVSDGFYMRRVVTDTGKASVTEYRTLDQNKAGAMMLVTLHTGRTHQIRVHFAAIG
HALYGDGLYSPDTHGFNRQALHCAHLRFWQPLKHKLIDLHAPLPADMATLAAKLKLSQQD
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttgaatggcagtatgagggaccgccgctgaaattggcggcttttttaaaacaa
cagggtttttcccgtgcacagcttaagaaacttcgttatcaaggcggatttgtttttgtc
aacaaacggcaacggcataccgcttatccggtgcgctcgggggacagaattttggtacag
acagcacctgagcacgcggcagacagtgtggtgccttattcgcatgatttggccatcagt
tatgaggatgacgattatctgatagtgaataaaccggccggggtggcatctattccagcg
gttgggcgccaaaataatagcatggcgaatatggtcaaggcttatttaattaaaaccaag
gctgaaagtcaggccgttcatgtggtgacacggttggatcgcgacaccagcgggttgatg
gtctttgccaagcatgggttggcgcacagcttgttggatcagcaattgcacagtcaagac
tttgtcaaacagtatgtggcaattgtgaccgcacaaacacctttagcaactcatggttgg
atcgtattgcccattggcgtcagtgacggcttttatatgcgtcgtgttgtaaccgatact
ggcaaagcttctgtcacggagtatcgaacacttgaccaaaataaggctggggccatgatg
cttgtcacgttgcataccgggcggactcatcaaattcgggttcattttgccgcgattggt
catgcgttgtatggtgatggcttatacagtcctgatacgcacggctttaatcgacaagca
cttcattgtgcccatttgcgtttctggcagccgttgaagcataaactgattgatttacat
gcaccacttccggctgatatggcaacgttagcggcgaagttgaaattatcgcaacaagat
tga
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