Lacticaseibacillus paracasei LC2W: LC2W_1057
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Entry
LC2W_1057 CDS
T01956
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lce
Lacticaseibacillus paracasei LC2W
Pathway
lce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LC2W_1057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lce03400
]
LC2W_1057
DNA repair and recombination proteins [BR:
lce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LC2W_1057
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LC2W_1057
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
T2SSE
AAA_7
AAA_19
AAA_5
AAA_30
DUF87
SLFN-g3_helicase
AAA_22
AAA
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AEA53391
UniProt:
K6RYA0
LinkDB
All DBs
Position
1034539..1036554
Genome browser
AA seq
671 aa
AA seq
DB search
MIERIADRKFDLVSPYQPAGDQPQAIAKLTKGFEEGKKEQILLGATGTGKTFTMSNIIAN
LNKPTLILSHNKTLAGQLYGEFKEFFPHNAVEYFVSYYDYYQPEAYVPSTDTYIEKDSAI
NDEIDKLRHSATSALLERNDVIVVASVSSIFGLGDPHEYKNHVLSLRTGMTIDRNTLLRQ
LVDIQFDRNDIDFQRGRFRVRGDVVEIFPASRDDHAIRVEFFGDEIDRITEVDALTGEVI
GTRDHVAIFPATHFMTSDEQMQRAIKSIAAELEAQLKVLRSENKLLEAQRLEQRTNYDIE
MMREMGFTSGIENYSRHMDGRKPGEPPYTLLDFFPKDFNIMVDESHVTMPQIRGMYNGDR
ARKQMLVNYGFRLPSALDNRPLKINEFEQHVHRILYVSATPGPYELDRVPKDDIAEQIIR
PTGLLDPKIEVRPVMGQIDDLVGEINKRVDAHERVFITTLTKKMAEDLTDYLKDMGIKVR
YLHSDIKTLERTQIIRDLRLGKFDVLIGINLLREGIDVPEVSLIAILDADKEGFLRAERS
LIQTIGRASRNEHGKVIMYADKVTDSMKAAIDETQRRRTIQEKFNEEHHITPKTIIKPIR
AAISSYEQSDDDKAEAKKTFAEVDYEDMSKADKKELVANLRSQMQAAAKKLDFEQAASLR
DTILELQADMS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaacgaatagccgatcgtaaatttgatctggtttcaccttaccaaccagctggt
gatcagccacaggccattgccaagttgacaaagggctttgaagagggtaagaaagaacag
atcttgttgggtgcaactgggactgggaagacctttacgatgagcaacatcatcgccaac
ttgaacaagccgaccttgattttgtctcacaacaaaacattggccgggcagctttatggt
gaattcaaggaattcttcccgcataacgcggttgagtattttgtttcctactatgattat
tatcaacctgaagcctatgtcccgagtaccgacacgtatattgaaaaagacagtgcgatt
aacgacgaaattgataaactgcggcacagcgccaccagtgcgttgttggaacgaaatgat
gtcatcgtggtggcctcagtgtcgtcaatctttggtttaggtgatccgcatgaatacaag
aatcatgtgctgtcattgcgaactggcatgacgattgatcgtaatacactgttacgccaa
cttgtagatattcaatttgatcgaaacgacattgattttcaacgtggtcgctttcgagtt
cgcggcgatgtcgttgaaattttcccggccagtcgtgatgaccatgcgattcgagtcgag
tttttcggtgacgaaattgatcggattaccgaagttgacgcattgaccggcgaagtcatc
gggacacgtgatcatgtggcaattttcccggcaacgcatttcatgaccagcgatgaacag
atgcagcgagcgattaagagcattgctgctgagttagaggcacaattgaaagtcctgcgc
agtgaaaacaaactgttggaggcgcaacggttagagcagcggacgaactatgatatcgaa
atgatgcgggaaatgggtttcaccagcggcattgaaaactattcacgccatatggatggc
cgtaagcctggtgaaccaccgtatacactgctggactttttcccgaaagacttcaacatt
atggtggatgaaagtcatgtcaccatgccgcaaattcgcgggatgtacaatggcgaccga
gcgcggaagcaaatgctggtcaactacggcttccgtttaccaagtgctttggacaaccgg
ccattgaaaatcaatgaatttgaacaacatgtccatcgtattttgtatgtgagtgctact
cctggtccttatgaactggatcgggttcctaaagacgatattgctgagcaaatcattcgg
ccaaccgggttgttggatccgaagatcgaggttcgaccggtcatgggtcaaattgatgat
cttgttggtgaaattaacaaacgggttgatgctcacgaacgtgttttcatcaccaccttg
accaagaaaatggctgaagatctgactgactacctgaaagacatgggcatcaaggttcgc
tacttgcatagtgacatcaagacacttgaacggacgcagattattcgtgatctgcgactt
ggcaagtttgatgtgctgattgggattaaccttttgcgtgaagggattgatgtccctgaa
gtttcgttgattgcaatcttggatgctgacaaggaaggctttttgcgtgccgaacgttcc
ttgattcaaaccattgggcgggcttcacgtaacgagcatggcaaagtcatcatgtatgct
gataaggtgacagattccatgaaggctgccattgatgaaacccaacgtcgacggacgatt
caggagaagttcaacgaagaacatcacatcacgccaaagaccattatcaaaccgattcgg
gcagctatttccagctatgaacaatcagatgatgataaagccgaggccaagaagactttt
gctgaagttgattatgaggatatgagcaaggctgataagaaggagttagtagcaaacctg
cgctcacaaatgcaggcggcggctaagaagcttgatttcgagcaggcagcgtcattacgc
gacacaattcttgaattgcaggctgatatgtcttaa
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