Lacticaseibacillus paracasei LC2W: LC2W_1149
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Entry
LC2W_1149 CDS
T01956
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lce
Lacticaseibacillus paracasei LC2W
Pathway
lce03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LC2W_1149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lce03400
]
LC2W_1149
Enzymes [BR:
lce01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LC2W_1149
DNA repair and recombination proteins [BR:
lce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LC2W_1149
Prokaryotic type
LC2W_1149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
AEA53483
UniProt:
K6S5F4
LinkDB
All DBs
Position
1118495..1119181
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AA seq
228 aa
AA seq
DB search
MKTLIHNDWQTVLEPVFESPEYAQLHAFLKEEYATKTIYPEMHHIFQAFEWTPFHDVKVV
ILGQDPYHNPRQAVGASFAVAPGVALPPSLQNIYKELQSDLGYPPVHHGYLKAWADQGVL
LLNAVLTVQAGEAYSHQNHGWEELTDAAIAALSARGGVVFILWGNAAKKKAAVIDTSKNA
IIASAHPSPLSASRGFFGSRPFSRTNAALEKMGEAPINWQLPETVKAD
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacattaatacataatgactggcagacggtgctggaaccggtatttgaaagtcct
gagtatgctcaactgcatgcgttcttaaaagaagaatacgcgacaaaaacgatttaccct
gaaatgcaccatatttttcaggcattcgaatggacacctttccatgatgtgaaggtggtc
attctaggccaggacccttaccacaatccgcggcaggcggttggtgcgagctttgcggtg
gcacccggtgtcgctttgccgccgtctttgcaaaacatttataaagagttgcaaagcgat
ttaggctatccaccggtccatcatggttatttgaaggcatgggcggaccaaggcgttcta
ttgttgaatgccgttttgacggtacaagccggcgaagcctattcccatcagaatcatggc
tgggaagagttgacagatgctgccattgctgccttgtctgcacgcggcggcgttgtgttc
atcctgtgggggaacgcggccaaaaaaaaggcggccgtgattgatacgagcaagaacgcg
attattgcatcagcgcacccaagcccgttatctgcatctcgtggcttctttggcagtcgc
ccgttttcgcgcaccaatgcggcactagaaaaaatgggcgaggccccgattaattggcag
ttaccagaaacggtgaaggcggattaa
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