Lacticaseibacillus paracasei LC2W: LC2W_1155
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Entry
LC2W_1155 CDS
T01956
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lce
Lacticaseibacillus paracasei LC2W
Pathway
lce03030
DNA replication
lce03430
Mismatch repair
lce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LC2W_1155
03430 Mismatch repair
LC2W_1155
03440 Homologous recombination
LC2W_1155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lce03032
]
LC2W_1155
03400 DNA repair and recombination proteins [BR:
lce03400
]
LC2W_1155
Enzymes [BR:
lce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LC2W_1155
DNA replication proteins [BR:
lce03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LC2W_1155
DNA repair and recombination proteins [BR:
lce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LC2W_1155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AEA53489
UniProt:
A0A5Q8BSN4
LinkDB
All DBs
Position
complement(1123459..1124001)
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AA seq
180 aa
AA seq
DB search
MDFIAMDFETANRKRASACSLALVVVQQNKVVDSFYTLINPQMQFDAQNIHIHGITPEMV
QDQPTFDRVWPHIQMFYTPGRIVTAHNAPFDVSVMRLTLDRYGIAAPRYQVIDTVKTSRQ
FLPKLPNHRLDTVSAALHIPLEHHHNALADSYACARILIAENEHFGEARIKSMMKLSKAG
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggactttatcgccatggatttcgaaaccgccaatcgcaagcgagcctcagcgtgttca
ttggcgctcgtggtcgtccagcaaaataaagtggttgacagtttttacacccttattaat
ccgcagatgcagtttgatgcccaaaacattcacattcatggcatcacccctgaaatggtt
caagatcagccaacatttgatcgagtttggccgcatattcaaatgttctatacgccaggt
cggatcgtgaccgctcacaatgcaccgtttgatgtttcggttatgcgactgacactggat
cgttacggcattgcggcgccgcgctaccaggtgattgacacggttaaaacctcgcgacaa
tttttgccgaagttgccgaatcatcggttagatactgtcagtgccgccttgcacattccg
cttgagcatcaccacaatgctttggcggatagttatgcctgcgcacgaattttgatcgcc
gaaaatgagcactttggcgaagcccggattaaaagcatgatgaagctttcaaaagcgggt
tga
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