Lacticaseibacillus paracasei LC2W: LC2W_1325
Help
Entry
LC2W_1325 CDS
T01956
Symbol
glyA
Name
(GenBank) Protein-tyrosine-phosphatase, ribose 5-phosphate isomerase and Glycine/serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lce
Lacticaseibacillus paracasei LC2W
Pathway
lce00260
Glycine, serine and threonine metabolism
lce00460
Cyanoamino acid metabolism
lce00630
Glyoxylate and dicarboxylate metabolism
lce00670
One carbon pool by folate
lce00680
Methane metabolism
lce01100
Metabolic pathways
lce01110
Biosynthesis of secondary metabolites
lce01120
Microbial metabolism in diverse environments
lce01200
Carbon metabolism
lce01230
Biosynthesis of amino acids
lce01240
Biosynthesis of cofactors
lce04981
Folate transport and metabolism
Module
lce_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lce00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LC2W_1325 (glyA)
09102 Energy metabolism
00680 Methane metabolism
LC2W_1325 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LC2W_1325 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LC2W_1325 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LC2W_1325 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LC2W_1325 (glyA)
Enzymes [BR:
lce01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LC2W_1325 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AEA53659
UniProt:
A0A243PRJ0
LinkDB
All DBs
Position
1279783..1281015
Genome browser
AA seq
410 aa
AA seq
DB search
MDFMAQDPEVFGAIHNEEERQEHNIELIASENIVSPAVRAAQGSVLTNKYSEGYPGHRYY
GGNQYIDVVENLAIDRAKKLFGAEFANVQPHSGSQANMATYRAFLEDGDKVLAMDLTDGG
HLTHGSPVSFSGQEYHFYHYGLDPKTERLNYAKIREQAEQVQPRMIVAGASAYSREIDFK
KFREIADHVGAFLMVDMAHIAGLVAAGLHMNPVPYADVVTTTTHKTLRGPRGGLILAKAQ
YGKAINSALFPGIQGGPLDHVVAAKAVALGEALQPSFKTYAQHILDNMQAMVSGFEEDPH
LRLISGGSDNHMVLIDVTGYGVNGRQVQDLLDEVGITTNKNQIPGEQNGPFKTSGIRVGT
AAITTRGFTADESKRVGELISAAIAQRDDQPALDQIHQEVLALTARHPLS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggatttcatggcacaagatccagaagttttcggtgcaattcataacgaagaggaacga
caagaacataacattgaacttatcgcttcagaaaacattgtttccccagcggttcgggcg
gcacaagggtcagtgctgacgaataagtattctgaaggttatcctggccatcgttattat
ggtggtaatcaatacattgatgtggttgagaatctcgccattgatcgcgctaaaaaattg
tttggggccgaatttgcaaatgtacagccgcattccggttcacaggcaaatatggccacg
tatcgcgcctttttagaagatggcgataaagtgttggcaatggatctaaccgatggcggc
catctgactcacggcagcccagttagttttagtggtcaggaatatcatttctaccattat
ggtttggatccgaagacagaacggctaaattacgccaagattcgtgagcaggctgaacag
gtgcaaccgcgaatgattgttgcgggggcttcggcttacagccgcgagattgatttcaaa
aaattccgcgaaattgccgatcatgttggggcctttttgatggtcgacatggcgcatatt
gccgggttggttgccgcaggtttgcatatgaatccggtaccttacgccgatgtggtcaca
acaacgacgcataaaacgctgcgcggcccccgtggcggtttgatccttgctaaggcgcaa
tacggcaaggccattaattcagcacttttccccggtattcaaggtgggccgcttgatcat
gtggttgcagcaaaagcagttgcattaggcgaagcgttgcagccatcttttaaaacatat
gctcagcatattctggataacatgcaggcgatggtgagtggttttgaagaagatccgcat
ttgcggttgatttctggtggttctgataaccacatggtcttgattgatgtaacgggttat
ggcgtaaatggtcgccaagttcaagatttactggatgaagttggtatcacgactaacaaa
aatcaaattccaggagagcagaatggcccgtttaaaaccagcggtatccgagtaggtacg
gctgccattaccactcgcggctttacagcagatgagagcaaacgagttggcgaattgatc
agtgccgcgattgcccagcgtgatgatcagccagctttggaccagattcatcaagaagtg
cttgcactgacagcccgtcatcctttatcatag
DBGET
integrated database retrieval system
