Lacticaseibacillus paracasei LC2W: LC2W_1517
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Entry
LC2W_1517 CDS
T01956
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lce
Lacticaseibacillus paracasei LC2W
Brite
KEGG Orthology (KO) [BR:
lce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lce03016
]
LC2W_1517
Enzymes [BR:
lce01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LC2W_1517
Transfer RNA biogenesis [BR:
lce03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LC2W_1517
Prokaryotic type
LC2W_1517
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AEA53850
UniProt:
A0A0K1KZ11
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All DBs
Position
1468270..1469232
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AA seq
320 aa
AA seq
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MEIQFLGTGAGSPSKSRNVSSLALKLLDERNEVWLFDAGEGTQHQILQTAIRPRKIAKVF
ITHLHGDHIFGLPGFLASRSNQGGTDPLTIYGPSGIEDFVKTSLKVSQSHLSYPLKFVLL
QHPGVAFEDQTFKVTFDRLDHRITSFGFRIEEKPHPGELLIDKVRAAKIPSGPVYAALKA
GETVTLPDGRIFDGHDFIGPAQPGRTVAIFGDTRMCNRALPLAAGADVLVHESTFGPDES
QLAKQYYHATNVQAAALAKRAGVGRLLLNHISARYLSPGVAMLEKTARQIFPNTHVVKDF
EEINIPFRSEQSEPAVTVKS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggaaattcaatttttgggcacaggcgcagggtcgccttccaagtcccggaatgttagc
agtttagccttaaaattacttgatgagcgtaatgaggtttggttgtttgatgccggggaa
ggcacacaacatcagattttacaaaccgctattcgaccacgaaaaattgccaaagtattt
attactcacttgcatggggaccatatttttggcttgccagggtttttggccagtcgctcc
aaccaaggcggcacagatccgttgacgatttacgggccttctggcattgaggattttgta
aaaaccagtttgaaagtttctcaaagtcatctcagttacccgttaaaatttgttttatta
cagcatccaggcgtggcttttgaagatcaaactttcaaagtcacttttgatcgcttggat
catcgaattacgagctttggttttcggatcgaagaaaaaccgcatcctggcgagttgttg
attgataaggtacgtgccgctaaaattccttctggaccggtttatgcggctttgaaggcc
ggcgaaactgtaaccttgccagatggccggatttttgacggccacgatttcattggccct
gcgcaacctggcagaacggttgccattttcggggatacccgcatgtgcaatcgcgcgctg
cctttagcagcaggcgctgatgtgttggttcacgaaagtacctttggaccggatgaaagc
caattggctaagcagtattatcatgcaaccaatgtacaagcagcggcgttggctaaacgt
gcaggtgtcgggcggctcttgctgaaccatatttcggcacgatatctgagtcccggggta
gcgatgttggaaaaaacggcgcggcagatttttccaaatacgcatgttgtcaaagacttc
gaggaaattaacattccatttcggagtgaacaatcggaacctgctgtcacagttaaatca
taa
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