Lacticaseibacillus paracasei LC2W: LC2W_1545
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Entry
LC2W_1545 CDS
T01956
Symbol
hupA
Name
(GenBank) DNA-binding protein HU-beta-like protein
KO
K03530
DNA-binding protein HU-beta
Organism
lce
Lacticaseibacillus paracasei LC2W
Brite
KEGG Orthology (KO) [BR:
lce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lce03032
]
LC2W_1545 (hupA)
03036 Chromosome and associated proteins [BR:
lce03036
]
LC2W_1545 (hupA)
03400 DNA repair and recombination proteins [BR:
lce03400
]
LC2W_1545 (hupA)
DNA replication proteins [BR:
lce03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LC2W_1545 (hupA)
Chromosome and associated proteins [BR:
lce03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LC2W_1545 (hupA)
DNA repair and recombination proteins [BR:
lce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LC2W_1545 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
Ribosomal_L12
Motif
Other DBs
NCBI-ProteinID:
AEA53878
LinkDB
All DBs
Position
1497084..1497365
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AA seq
93 aa
AA seq
DB search
MFMANKAELIESVATATGLTKKDATAAVDAVFGSIQDSLSKGDKVQLIGFGNFEVRERAA
RKGRNPQTGAEIKIPASKVPAFKPGKALKDAVK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttcatggcaaacaaagcagaattgatcgaaagtgttgcaaccgcaactggtttgacc
aagaaggatgcaaccgcagctgttgatgcagtattcggttctatccaagactccctttca
aagggtgacaaggttcagttgatcggctttggtaacttcgaagtgcgtgagcgtgccgct
cgtaagggccgcaacccacaaaccggtgccgagatcaagatcccagcatccaaggtacca
gcattcaagcctggtaaagcactcaaggacgccgttaaataa
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