Lacticaseibacillus paracasei LC2W: LC2W_1745
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Entry
LC2W_1745 CDS
T01956
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lce
Lacticaseibacillus paracasei LC2W
Pathway
lce03030
DNA replication
lce03430
Mismatch repair
lce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LC2W_1745 (polC)
03430 Mismatch repair
LC2W_1745 (polC)
03440 Homologous recombination
LC2W_1745 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lce03032
]
LC2W_1745 (polC)
03400 DNA repair and recombination proteins [BR:
lce03400
]
LC2W_1745 (polC)
Enzymes [BR:
lce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LC2W_1745 (polC)
DNA replication proteins [BR:
lce03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LC2W_1745 (polC)
DNA repair and recombination proteins [BR:
lce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LC2W_1745 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
HHH_6
tRNA_anti-codon
DNA_pol3_a_NI
HHH_3
DEDDh_C
RNase_H_2
Zn_ribbon_8
T2SSK
DUF655
YhfH
Motif
Other DBs
NCBI-ProteinID:
AEA54077
UniProt:
A0AB36XEK3
LinkDB
All DBs
Position
complement(1695566..1699900)
Genome browser
AA seq
1444 aa
AA seq
DB search
MALSQHEMFEKLLDQLDLAADVRQDPSLTSGTVQNVTIHEQSRRYDFTLGFDAILPFQTF
NAIATKLPLVFQQIAATDLSVVVTQPTITDELLAQYWQYVVTHAEIGTGIVRELCEKQVP
TLENDRAVIKTENEQIRQYLIQQGLGKLEETYRQVGFSGLRMQAEVDEEQAAQSMAAFQA
QRAEETAKMAKAAAEVVKQQAAKQKQVQTDGPVQMGRQMKMTDAPQQMVTITQEERSVTV
EGYVFDVEVRELRSKRQLLIFKVTDYSSSFIAKKFSNGPEDEAMFARIQKGQWLRVRGSV
QEDNYSRELTINAQDIQTVSHPDPTDDAEGEKRVELHLHTNMSQMDAMNPISDYVKRAKE
WGHKAIAVTDHAGLQAYPEAHSAAVKAGLKMLYGVEINLVDDGTPVAYRADEPRDLASAE
YVVFDVETTGLSAVYDKVIELAAVKMKDGKVIDQFEEMIDPGFPLSELTINLTHITDDMV
HGSKSEVDVFKLFQQFCDGAIMVGHNVTFDVGFLDNGYERHGLADIDNPVIDTLELSRML
HPERKNHKLDTLAKQYKVSLEHHHRANADAEATGYLLYALEKEAAKMYGMTTLNQLNDRV
GAGDAYKAARPSHAIVFAKTQAGLKNLFKLVSLSNVKYFYRVPRVPRSQLQKLREGLLVG
SACSNGEVFTAMMQKGEAEARAKASFYDYLEVQPLPVYQPLIEAGLIKGEAHLKDIIQKI
INIGSELEKPVVATGDAHYLDQHDAIYRQILIHSQGGANPLNRHSLPDVHFRSTSEMLTD
FSWLGEEKAHELVVDNSNLIANWVDDDITPVKDKLYTPEVPGVEENLKHDVMTTAHELYG
DPLPDIVAQRLDKELKSIIGNGFSVIYNIAQRLVLKSNKDGYLVGSRGSVGSSLAATMAG
ITEVNPLPPHYRCPNCQYSEFFTHGEIGSGFDLPDKQCPKCGADLHKDGHDIPFETFLGF
HGDKVPDIDLNFSGDYQPIAHNYIKVMFGEDHSFRAGTIGTVADKTAYGYVKAYERDTGQ
QLRGAEIDRLAQGDTGVKRTTGQHPAGILIVPADMDIYDFTPIQYPADDQNAAWMTTHFD
FHSIHDNILKMDVLGHDDPTMIRMLQDLSGVEPKSIPTDDPGVMALFSGTKSLGVTPEQI
NSKMGTLGIPEFGTRFVRGMLEETKPTTFSELLQISGLSHGTDVWLGNAEELIKQGIVTL
KEVIGCRDNIMMDLIHWGMEDSMAFNIMEHVRKGRGIPDDWQKAMRENENVPDWYIESCL
KIKYMFPKAHATAYILMALRIAWFKVHYPLIYYTAYFSVRAEDFDLAAMSHGKEAVKAAM
KEITDKGMDASTKEKQLLTVLEIANECLERGFKIKMIDVTKSDSHNFLIQDDHTILAPFR
AVPGLGDNVAKQIVAAREEKPFLSKEDLANRGKVSKTLIDYMTTNHVLDDLPDENQLSLF
DGLF
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
ttggctttatcccaacatgagatgtttgaaaaattattggatcaactcgacttggcggca
gatgtccgacaagatccttcgttgaccagcggcacggtacaaaacgtgaccattcatgaa
caatctcggcgttatgatttcactttggggtttgacgcgatcctgccatttcagactttc
aatgcaattgcgaccaagttgccgttagtgtttcaacagattgctgcgactgatttatcg
gtggtggtaacccagccaaccattactgacgagttattagctcaatattggcagtacgtc
gtgacccatgccgaaattgggacaggaattgttcgcgagttatgtgaaaaacaagtgcca
acacttgagaatgatcgtgctgtgatcaaaaccgaaaatgagcaaattcggcaatacttg
attcagcaagggctcggtaagctcgaagaaacttatcgtcaggttggcttctctggctta
cggatgcaagccgaagttgatgaggaacaagcagcccaatcgatggcggcttttcaggct
caaagagctgaagaaaccgctaaaatggccaaggctgctgcagaagtagtgaagcagcaa
gcggctaaacaaaaacaagttcaaactgacggcccagttcaaatggggcggcagatgaaa
atgaccgatgccccgcaacaaatggtgaccatcacgcaagaggaacgttcagtgacggtt
gaaggctatgtttttgatgttgaggttcgggaactgcgatctaagcggcagttactaatt
ttcaaagtgactgactatagctccagcttcattgcaaaaaaattcagcaatggtccagaa
gatgaagccatgtttgcgcgcattcaaaaaggtcagtggctacgcgtgcgaggcagtgtt
caagaggacaactattcccgtgagctgacgattaatgcacaggatattcaaactgtctcc
catccggacccaaccgatgatgctgaaggtgagaaacgtgttgaattacatctgcacacc
aatatgagtcaaatggacgctatgaatccaattagcgactatgtgaagcgggctaaagag
tgggggcataaggcgattgctgtcactgaccatgcaggtttgcaggcttatccagaggcg
cattcagccgctgtcaaagccggtttaaaaatgctttatggcgtcgagataaacttagtt
gatgatggcacgccggttgcttaccgagcagatgagccgcgtgatttagccagcgctgaa
tatgtggtttttgacgttgaaaccactggcttatctgcggtttacgacaaagtgattgaa
ttggctgccgtcaaaatgaaagacggcaaagtgattgatcaattcgaagaaatgatcgat
ccgggtttcccactttctgaactgacaattaatttgacacatatcactgatgacatggtg
catggatcgaagtctgaagtcgatgttttcaaattgtttcagcagttttgcgacggtgcc
attatggtgggtcataatgtgactttcgatgttggctttttggataatggttacgagcgg
catggattggcagatattgacaatccggtcatcgataccttggaattgtcgcggatgctg
catccagaacggaagaatcacaaactcgataccttggcgaagcagtacaaagtcagccta
gaacatcatcatcgcgctaatgccgatgccgaggcaactggttatctgctttatgctttg
gaaaaagaagcggccaagatgtatggcatgacgaccctcaatcagttgaatgatcgggtt
ggggcgggggatgcctataaagctgcccggccaagtcacgcgattgtttttgcgaaaaca
caagcgggattgaaaaaccttttcaaattagtatcgttgtctaatgttaagtacttctat
cgggtgccacgggtgccacgcagtcagctgcaaaaactgcgtgaaggcttgttagtcggt
tcggcttgttccaacggcgaagttttcacagcaatgatgcaaaaaggcgaagcggaggcc
cgcgccaaagcgtcattttatgattatctagaagtgcaaccattacctgtctatcaacct
ttgatcgaggctggtttgatcaaaggcgaggcacatctaaaagatattattcaaaaaatc
atcaacatcggatcggaactggaaaaaccagtcgtagcgacaggcgacgcccattatttg
gatcaacatgacgcgatttatcgacagattctgattcatagtcaaggcggagccaatccg
ctcaatcgccacagtttgccagatgtgcattttcgttcgacaagtgagatgctgaccgat
tttagttggcttggggaagagaaggcccacgagctggtagttgataattctaacttgatt
gccaactgggttgacgatgatattacgccggtgaaggataagctttacacacctgaagta
cctggggtggaagaaaatctgaaacatgacgtgatgaccacggcgcatgaattgtatggc
gatcctttgccagacattgtggcgcagcgactcgataaagaactaaaaagtatcatcggt
aacgggttctctgttatttacaacatcgcgcaacggctggttttgaagtccaataaagac
ggatacttggttggctctcgaggatcagttgggtccagtttagccgcaacgatggccggc
attactgaggttaatcctctgccgccgcattatcgttgtcctaactgtcaatacagcgaa
ttcttcactcatggcgaaatcgggtccggttttgatttgccagataaacaatgccctaaa
tgcggcgctgatttgcataaagatggccacgatattccgtttgaaactttcttaggcttc
cacggtgataaagtgccggatattgatctgaatttttcgggtgactatcagccaattgca
cataactatatcaaagtcatgttcggtgaggatcatagtttccgtgctgggaccattggc
acggttgcagacaaaacggcgtatggttatgttaaagcatatgaacgtgacacgggacag
caactgcgcggtgccgagattgatcggctggcgcaaggtgacacgggggttaaacgtacc
actgggcaacacccggcaggtattttgatcgtgcccgctgacatggatatttatgatttc
acaccgattcagtacccagctgatgatcaaaatgctgcctggatgaccacgcactttgat
ttccattccatccatgacaatattttgaaaatggacgtgctggggcatgatgacccgacg
atgatccggatgctgcaagatttgtccggggttgagccaaaatcaattccaacggacgat
cctggcgtcatggcgcttttttccggcaccaagagtctgggtgtcacgccggaacagatt
aactcgaaaatggggacgttaggcattccagaatttgggacgcgttttgttcgcggaatg
cttgaggaaaccaagccaacaaccttcagcgaactgttacagatttccggtttgtctcac
gggaccgatgtttggttaggtaacgctgaagaactgattaagcaaggcattgtcacgctt
aaagaagtcattggttgtcgtgacaacattatgatggacttgattcactggggcatggaa
gattcaatggcctttaacatcatggaacatgtgcgtaaaggtcgcggtattccagatgat
tggcaaaaggcaatgcgtgaaaacgagaacgtgcctgattggtatatcgagtcctgctta
aagatcaagtacatgtttccgaaagcacatgcgaccgcctatatcttaatggcgctacga
attgcttggttcaaggtccattacccgttgatctattacacggcatatttctcggttcga
gctgaagactttgatcttgccgccatgagtcatggcaaggaagcagtcaaagcggccatg
aaggagattaccgataagggcatggatgcctctaccaaggaaaagcagttgctgacggtt
ttggaaatcgccaatgaatgtctcgaacgcggctttaagattaaaatgattgatgtcacg
aagtcggattcgcacaatttcttgattcaggatgatcacacgattctggcaccattccgt
gctgttccgggcctgggcgataacgttgccaagcaaatcgtggccgctcgtgaagaaaaa
ccattcctgtccaaggaagatctggctaatcgtggtaaggtttcgaaaacgttgattgat
tatatgacaacaaaccatgtcttggatgacttgccagacgaaaaccaattatcgctattt
gacggtttattctag
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integrated database retrieval system
