Lacticaseibacillus paracasei LC2W: LC2W_1779
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Entry
LC2W_1779 CDS
T01956
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lce
Lacticaseibacillus paracasei LC2W
Brite
KEGG Orthology (KO) [BR:
lce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lce03019
]
LC2W_1779
03009 Ribosome biogenesis [BR:
lce03009
]
LC2W_1779
03036 Chromosome and associated proteins [BR:
lce03036
]
LC2W_1779
Enzymes [BR:
lce01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LC2W_1779
Messenger RNA biogenesis [BR:
lce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LC2W_1779
Ribosome biogenesis [BR:
lce03009
]
Eukaryotic type
90S particles
RNase
LC2W_1779
Prokaryotic type
rRNA processing factors
LC2W_1779
Chromosome and associated proteins [BR:
lce03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LC2W_1779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Dicer_dsRBD
DND1_DSRM
DUF6614
Phage_Mu_Gp27
Motif
Other DBs
NCBI-ProteinID:
AEA54111
UniProt:
A0A806EK61
LinkDB
All DBs
Position
complement(1727661..1728356)
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AA seq
231 aa
AA seq
DB search
MVASEFVSELRQRYGIEFHDLSLLDEAFTHSSYVNEHKELGLKDNERLEFLGDAVLELTV
SDYLYRKFPDKPEGDLTRIRAAAVQTAAFSAFSKEAHFDRYIKLGKGEEKAGARKRLTLL
EDLFEAFNGALYLDQGRDANIRFAQQIIFPKIDAGEFSDDQDHKTALQEVLQQNGDVAIV
YHLLDEQGPAHERQFHVDVEVDGRVLGTGFGKNKKAAEQAAAKAALASLKR
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggttgcctcagagtttgtgagtgaattgcgtcaacgttatgggatcgaatttcatgac
ctcagtctattggatgaggcgtttacgcattcctcatatgtgaatgaacataaagaatta
ggtttaaaagacaatgaacgattggaatttttaggcgatgctgtcttggaattgacagtt
tcagattatttgtatcgcaagtttcccgacaaacccgaaggcgatctcacccgaattcgg
gcagcggctgttcagacagcggccttctcggctttttcaaaagaagcgcactttgaccgg
tatattaaacttggcaaaggtgaggaaaaagctggggcgcggaaacgcttaacgttgcta
gaagatttatttgaggccttcaatggcgccttataccttgatcaaggacgcgatgccaac
attcggtttgctcagcagattattttcccgaaaattgacgcgggagagttttcagacgat
caagaccacaaaacggctttacaggaagttttgcagcaaaatggtgatgtggcgattgtt
tatcacttattagatgagcagggaccagcccatgagcggcagttccacgttgatgtcgaa
gtcgatggccgggttttgggtaccggttttggcaagaataagaaagcggctgagcaagct
gctgcaaaagctgcattagccagcttgaaacggtaa
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