KEGG   Lacticaseibacillus paracasei LC2W: LC2W_1854
Entry
LC2W_1854         CDS       T01956                                 
Name
(GenBank) DNA-binding response regulator YycF
  KO
K18941  two-component system, OmpR family, response regulator ArlR
Organism
lce  Lacticaseibacillus paracasei LC2W
Pathway
lce02020  Two-component system
Brite
KEGG Orthology (KO) [BR:lce00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LC2W_1854
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:lce02022]
    LC2W_1854
Two-component system [BR:lce02022]
 OmpR family
  ArlS-ArlR (virulence regulation)
   LC2W_1854
SSDB
Motif
Pfam: Response_reg Trans_reg_C
Other DBs
NCBI-ProteinID: AEA54186
UniProt: A0A1J3BZ04
LinkDB
Position
complement(1800908..1801594)
AA seq 228 aa
MSKILIIEDEKNLARFVELELKHEGYETEVHFNGRTGLEAALAEDWDAILLDLMLPELNG
LEVCRRVRQVKNTPIIMMTARDSVIDRVSGLDHGADDYIVKPFAIEELLARLRALLRRIS
IEGENNTAKQTTIKYRDLVIEKENRVVRRGDDIIELTKREYELLLTLMENVNVVLARDVL
LSKVWGYNSDVETNVVDVYVRYIRNKIDRPGEPSYIQTVRGTGYVMRS
NT seq 687 nt   +upstreamnt  +downstreamnt
atgagtaaaatattaattattgaagatgaaaaaaatttagcgcggtttgtcgaactggaa
ttaaaacacgagggctatgagaccgaagtgcattttaacggtcgaaccgggttggaagcg
gctttggcagaggactgggatgccatcttgcttgacttgatgttgccagaattaaacggc
cttgaagtttgccggcgcgttcgtcaggtgaagaatacaccgatcattatgatgaccgcg
cgggattctgtcattgatcgcgtcagtggcttggatcatggcgctgatgactacattgtg
aagccatttgccattgaagaattactcgcgcgcttgcgtgctttgttgcgccgaatcagt
attgaaggcgaaaacaacaccgctaagcagacaaccatcaaatatcgtgatttagtgatt
gaaaaagaaaatcgcgttgttcggcgcggcgacgacattattgaattaaccaaacgtgag
tacgaattattgctgacgcttatggaaaatgtcaacgttgttttggctcgtgacgttttg
ctctcaaaggtttggggttacaactctgacgtggaaacgaatgttgttgacgtctatgtc
cgttatattcgtaataaaatcgatcgaccgggtgagccgagttatattcaaacggttcgg
ggaaccggctatgttatgcgttcgtaa

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