Lacticaseibacillus paracasei LC2W: LC2W_2024
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Entry
LC2W_2024 CDS
T01956
Name
(GenBank) hypothetical protein
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lce
Lacticaseibacillus paracasei LC2W
Brite
KEGG Orthology (KO) [BR:
lce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lce03009
]
LC2W_2024
Enzymes [BR:
lce01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LC2W_2024
Ribosome biogenesis [BR:
lce03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LC2W_2024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AEA54356
LinkDB
All DBs
Position
complement(1967624..1968487)
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AA seq
287 aa
AA seq
DB search
MRYSFTTKVTRSTTVKRWLAEQGVSHRLFKKMLVDHLIWVDGQASDNGPVEAGQIIRFEI
PTSKTLTPEFAPLEVIYEDANWLIVSKPAGLTSVPGPHTPNSSLLNRIAGYLVEQKIDAP
QPAIMTRLDRDTVGLVLAAKHPYAQGRFDQAHQRTLTKHYLAVVSGKLPSPKGEIDAPLK
LAADGIHRIVAADGQTAVTKYRVLKEKTNTLVDVQLLTGRTHQIRVHFASLGHPLIGDHL
YGQPDARIPYQALQATRLNFTDPFSGKQITAELAVPALFNQLLTEAP
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcgatattcatttacgacaaaggtgacacggtcgacaacggtcaaacgctggctagca
gagcaaggcgtcagtcatcgcttgttcaaaaaaatgctagtggatcatttgatctgggtt
gatgggcaagcatctgacaatggtccggttgaagctggccagattatccgctttgaaatt
ccgactagcaaaacgctgacgccagagtttgcgcctttagaagtcatttatgaagatgct
aattggctaattgtctcaaaaccagctggattgacaagcgttcccggaccccacacaccg
aattcgagtttattgaatcgtattgcgggctatttggttgagcaaaaaattgacgcacca
caaccagccatcatgactcgacttgatcgcgatactgtcggactggtgctggctgcaaaa
catccatacgcacaaggccggtttgatcaagcacatcaacgcacactgacgaagcattac
ttggcggttgtcagcggtaaattaccatccccaaaaggtgaaattgatgcacctctgaaa
ttagcggcggatggcattcaccgaattgtggcagctgatggccagacggcggtgacaaaa
taccgggttttaaaagaaaaaaccaatactttggttgatgtccagttgctgaccggtcgg
acacatcaaattcgcgttcattttgcaagtttaggtcatccattaattggcgatcacctt
tatggtcagccagatgcgcgaataccgtatcaagccttgcaggcgacgcggttgaatttt
acggatcctttttcgggaaagcagattacggctgaattggcggtgccggctttgtttaac
caactgctgacagaagcaccctaa
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