Lacticaseibacillus paracasei LC2W: LC2W_2221
Help
Entry
LC2W_2221 CDS
T01956
Name
(GenBank) AAA ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lce
Lacticaseibacillus paracasei LC2W
Pathway
lce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LC2W_2221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lce03400
]
LC2W_2221
Enzymes [BR:
lce01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LC2W_2221
DNA repair and recombination proteins [BR:
lce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LC2W_2221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
SH3_13
PIF1
AAA_11
Viral_helicase1
PhoH
AAA_22
AAA_25
AAA_16
NAT10_TcmA_helicase
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AEA54553
LinkDB
All DBs
Position
complement(2161711..2164167)
Genome browser
AA seq
818 aa
AA seq
DB search
MTLTQEATITGDMGYYNRRAIITADLVYDDAGSLRYNKPSYKLARLHFGLPKEPRRQWQL
IDTLLVHQPTVRRRLHEHFADDTPILTIFSTDQVKPDSVPGIGPATIKKIATAIRGKLEI
AVLANHWGKALSSMTYEKIWLAYKDANLAMQSIDANPYLLMSVAQLDFKKVDTFAKTRGI
AANDPHRLTAGLQYIFRTAVLTQGLTYITITWFRQQAATLLAVREADLKMFADPQEALQY
GFLLNEQYGLVTSCDMFATEGSVARIIKVAQKTAEPLMAPDELDDALDQFLDRFHLTIND
QQRAAFQNVNRHGLSVLNGSAGTGKTWLTDLLVRFFNAQAKGKSVLLAPTGRAAKVLAKY
THEPAATIHAYLHLLPGEETGQFDADADWETFGDARLIVVDESSMLTTPLAYTVLKNVNF
KKAHVLFVGDVFQLPPIGPGNFLKDCLDDEQVAATTLTRVYRQDSQSGVLALANRIRERL
ALPFGPDDDRYVSGNVALCNQRNAGRVFDAGVKAYQDALVKSGQQIDAQLLIVNKNIGAT
GRLRFNAELQALVNPAKNGEPEYISSYVDPVTNQKHHLRLNDRVMILKNDKHVPLVDPKT
WERRAVLGENGLQQTDDFGTKRWRETIVANGDTGVVAHIDTKRHFVVVQIGQQYCYYSFG
SVPRDLTLAYAITVHKAQGGQADTVIAIVNGADMMLNAQSFYTALTRTQQQFIFFGDFRV
LLARTKIYPIDARHDLLGSFLSGQLTVDTFSRYTFDQVLAWLDKRHAERLSTRPALEAEE
VKPSEQPFSVRYAEQLDILDQIVDEVAQLPARKPARDV
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcacccaagaggcaaccattaccggtgatatgggctactacaatcgccgagcg
atcatcaccgctgatttggtttacgatgatgctggctcattgcgttataacaagccgtct
tacaaattggcgcggttgcattttggcttgcccaaagaaccgcgccggcagtggcagctg
attgacacgttgctggtgcatcagccgacagttcggcgccgattgcatgaacattttgcg
gatgataccccgatcttgacgattttttcaaccgatcaggtaaaaccggatagtgtcccg
ggcattggtcccgccacaattaagaaaatcgctaccgccatccgcggcaaactggaaatt
gccgtgttggccaatcactggggcaaggcactaagctcaatgacttatgaaaaaatttgg
ttggcttataaagatgccaatttggccatgcaaagtattgatgccaatccgtacctgttg
atgtcagttgcccagcttgatttcaagaaagtcgacacctttgctaaaacgcgtggcatt
gcagcgaatgatccgcatcggcttacggcaggattgcaatatatttttcgcacggctgta
ctcacgcaaggattgacctatatcaccattacgtggttccggcagcaagctgctacttta
ttggctgtacgcgaagccgatttgaaaatgtttgctgatccgcaagaagccttgcaatac
ggctttttacttaatgagcagtatggactggtgacgagttgcgatatgtttgccacagaa
ggatcggtggcgcggattattaaagtcgctcaaaaaacagccgaaccgctgatggctccg
gatgagctagatgatgccctcgatcagtttctcgatcggtttcatttaaccatcaatgat
cagcagcgcgccgcttttcaaaatgtgaaccgtcatggcttgagcgttttgaacggcagt
gctggcaccggtaaaacttggttgaccgatttgttggttcggttttttaacgcccaagca
aaagggaaaagtgtcttgcttgcaccaactggccgcgccgccaaagttttggcaaagtat
acgcacgagccagctgctacgattcatgcttatctgcatctactgccaggtgaagaaacc
ggccagtttgacgcggatgccgactgggaaacctttggcgatgcgcgactcattgtggtg
gatgaaagctcaatgctgacaacgccgctagcctacacggttttgaagaacgtcaatttc
aaaaaggcgcatgtgctgtttgtcggtgatgttttccaactgccgcccatcggtcctggc
aactttctaaaagattgtctagacgatgaacaggtggcggcgacaacactgacccgcgtt
tatcggcaagatagccagtccggcgtgttagcactagctaatcgcattcgtgagcggtta
gcgctgccttttggaccagacgatgatcgctatgtcagcggcaatgtggcgctgtgtaac
caacgcaatgctggccgggtgtttgatgctggggtgaaggcgtatcaggatgcgctggtc
aaaagtggtcagcagattgatgcgcaattgttgatcgtgaataaaaacatcggcgcaact
ggccgcttgcgatttaacgcggagttgcaagcgttggtcaacccggctaaaaatggcgaa
ccggagtatatcagcagttacgtggacccggtcactaatcaaaaacatcacttgcgcctc
aatgatcgggtcatgattttgaaaaacgacaaacatgtcccgcttgttgatccgaaaaca
tgggaacggcgtgcggtgctgggcgaaaatggcttgcaacagaccgatgattttggcact
aaacgttggcgtgagacaattgtggcaaacggcgacacaggggtggtagcccatattgat
accaaacgccattttgttgtggtccaaatcggccagcaatattgttactacagttttggc
agcgtgccgcgcgatttgacgctggcttatgcgattacggtgcataaggcccaaggtggg
caggcagataccgttattgccattgtcaacggcgccgacatgatgctcaatgcccaaagc
ttttatacggcgttgacgcgcacccagcagcaattcatcttttttggtgattttcgggtg
ctcttagcccgcaccaaaatctatcccatcgacgcccgccatgatttgctcggcagtttt
ctatccggccaactgacagtcgatacgttcagccgctatacctttgatcaggtcttggcc
tggctggataagcggcacgctgaacgcttatccacgcgacccgcgctggaagcagaggaa
gtcaaaccaagcgagcagccattttccgttcgttatgcggaacaactggacatcttggat
cagattgtcgatgaggttgctcaattgccggctagaaaacctgctcgggatgtttga
DBGET
integrated database retrieval system
