Lacticaseibacillus paracasei LC2W: LC2W_2352 Help Entry LC2W_2352         CDS       T01956                                  Name (GenBank) hypothetical protein   KO K09952   CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] Organism lce  Lacticaseibacillus paracasei LC2W Brite KEGG Orthology (KO) [BR:lce00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02048 Prokaryotic defense system [BR:lce02048]     LC2W_2352 Prokaryotic defense system [BR:lce02048]  CRISPR-Cas system   Type II CRISPR-Cas system    Type II signiture cas proteins     LC2W_2352 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cas9_REC Cas9_PI Cas9_RuvC HNH_4 Cas9-BH SUa-2TM Cas9_a LBD_receptor RuvC_III RRXRR TBCA Csx1_CARF Motif Other DBs NCBI-ProteinID:  AEA54683 UniProt:  A0AB36X797 LinkDB All DBs Position complement(2290632..2294717) Genome browser AA seq 1361 aa AA seqDB search MTKLGKPYGIGVDIGSNSIGFAAVDENSHLIRLKGKTVIGARLFEEGKAAADRRASRTTR RRLSRNRWRLSFLRDFFESHITPTGPNFFMRQKYSEISPKDKARYKYEKRLFNDRTDAEF YQQYPTMYHLRNRLLTDPSKADVREIYFAIHHILKSRGHFLTSGYAKDFNTNKVALNEIF PALQDAYAQVYPDLDITFDENKVNEFKTVLLNEKATPSDTQRALVNLLLAEDGDKDILKQ QKQVLTEFAKAVVGLKTKLNVALGTEVDSSEATVWNFSLGQLDDKWAGIESAMTDEGTEI LDQIRDLYRARLLNGIVPAGKTLSQAKVDDYAQHHEDLELFKDYLKQLEDDGTAKAIRQL YDRYIDGDDAKPFVREDFVKALTKEVTAHPNAKSPELLERLAQPDFMLKQRNKANGAIPV QMQQRELDQIIKNQSVYYDWLAAPNPVEKHRKSMPYQLDELLNFRIPYYVGPLVTAKEQK AAQGGVFAWMVRKDPDGNITPYNFDEKVDREASANTFIQRMKTTDTYLIGEDVLPKQSLL YQRYEVLNELNNVRVNNEKLSIEQKQQVIRELFERHNSVTIKQFAENLRAHGDYAHIPEI RGLADEKRFLSSLSTYRQLKSLLPDAIDDPAKQADIENIIAWSTVFEDAAIFKTKLKEIN WLDSQTITKLSNIRYRGWGQFSHKFLNGLTLGNGHTIIQELFLSNNNLMQILTDETLQKK MTELNADKLKAANINDAIDDAYTSPSNKKALRQVLRVIEDIKRAADGQDPSWLYVETADG GGTPGKRTRARQHQLQEIYANAAHELIDSAVRGELEDKIADKADFNDRLVLYFMQGGRDI YTGTPLNIDQLSSYDIDHILPQSLIKDNSLDNRVLVHAIINREKNATFASTIYAQKMNAT WRQWHEAGLISGRKLRNLQMRPDQIDKYASGFVARQLVETRQIIKLTEQIVAAQYPETKI IAVKAGLSHQLREELEFPKNRDVNHYHHAFDAFLAARIGTYLLKRFPNLQAFFTYGKFKK ADVKKLRGFNFIRDITHAEDKIVVKDTGEVIWDKKRDVDELDRIYNFKRMLITHEVHFEK ADLFKQTVYGAKDSKEAGGKKQLISKKKGYPVDIYGGYTQETGSYLSVVRLTKKAMYAVV KVSTRDAAKLAVAKSISEQKENETLNDIIDEKLSKISKNGKITHELFEVVLPRVGQKTLF KNSKYNLFLVNSDTYMHNYQELWMPREYQKMWKDISLSKYGDAQTEDQLDQIFGFIVSQV NSYFNLYDINQFRKKLNDAADKFATLPMRDTDDMQGKIATIGQLLIGLQANAARSDLRNL DIKTPLGLLQIPNGISLDSDTSVVYQSPTGLLEREVHLSDL NT seq 4086 nt NT seq  +upstreamnt  +downstreamnt atgacaaagttaggtaaaccatatggcattggagtcgatatcggctcaaactcgattgga tttgcggctgtggatgagaacagtcatcttattcgattgaagggaaaaacggttattggg gcaagactgtttgaagaaggaaaagcagcagcggatcgccgagcaagccgtaccactcgc cgtcgtttgagtcgaaatcgttggcggctcagttttttgcgtgatttttttgaatcgcat atcacgcctactggcccgaatttcttcatgcgtcaaaagtactcggaaatctcgccgaag gacaaggcccgttacaagtatgagaagcggctttttaatgatcggacggatgctgagttt taccaacagtatccaacgatgtaccatttacgcaatcggcttttgacagatccaagcaaa gccgatgttcgcgagatttattttgccattcatcatattttgaaaagtcgcgggcacttt ttgacgtctgggtatgccaaagattttaatacaaacaaggtcgcgttaaacgagattttc cctgcattgcaggatgcctacgctcaagtttatccggatctggacatcacttttgatgag aacaaggtgaatgagtttaaaaccgttctgttgaatgagaaagcgacgccaagtgacacg caacgagctttagtcaatcttttgttggctgaagatggcgacaaggatatattgaagcag cagaagcaggttttaactgagtttgctaaagcagtggtcggactgaaaacgaagctcaat gtggcgctagggaccgaagttgatagttctgaggccactgtttggaacttttcattaggg cagcttgacgataaatgggcaggcattgagtcagccatgactgatgaaggtaccgaaatt ctggaccagattcgtgatctttatcgagctcggctccttaatggtattgtgcccgcagga aagacgctttctcaggcaaaggttgatgattatgcacaacatcatgaagacctcgaattg ttcaaagactatttaaaacaacttgaagatgatggaacggctaaagcaatccgacagctt tacgatcgctatatagacggtgacgatgctaagccatttgtacgtgaagattttgttaaa gcgttaactaaagaagtgacggctcatccaaacgccaagtctcctgaactgcttgaacgt ttggcgcaaccggacttcatgcttaagcaacgcaacaaagcaaacggggctattccagtc caaatgcaacagcgggaattggatcagatcatcaaaaatcagtctgtttattatgactgg ctggctgcgccaaatccggtggaaaagcatcggaaaagtatgccttatcagttggatgaa ttgcttaattttcgaattccgtattacgttggaccattggtgacggctaaagagcaaaag gcagcacaaggcggggtttttgcttggatggttcggaaagatcctgatggtaatatcacg ccttataattttgacgaaaaggtagatcgcgaagcttcggctaatacctttattcagcgg atgaagacgaccgacacatacttgattggtgaagacgtgttgcctaagcaaagtttgctg tatcaacgctatgaggtgttgaatgaactgaataatgttcgtgttaataacgagaagctt agcatcgaacaaaaacaacaagttattcgagaactgtttgaacggcataatagcgtgaca attaaacaatttgccgaaaatctgcgagcgcatggtgattacgcccacattcctgaaatt cgtggtttagctgatgagaaacgttttttaagttcactttctacgtaccgtcaactgaaa agtcttttacccgatgcaattgatgatccagccaaacaagccgatattgaaaatatcatt gcgtggtcgaccgtttttgaagacgccgcgatttttaaaacgaaattgaaagagatcaac tggcttgacagccaaaccattactaagcttagtaacattcgatatcgaggatggggtcag ttttcgcataagtttttaaatggcctgacccttggcaacggacataccattattcaagaa ttgttcctatccaacaacaacttgatgcagatcttaacagacgaaacgctgcaaaagaaa atgaccgagttgaacgccgacaaattgaaagcggccaatatcaatgatgccattgatgat gcgtatacatcaccaagtaataaaaaggcattgcgtcaggtccttcgggttattgaggat attaaacgtgctgctgatggtcaagatcctagttggttgtacgttgagactgcggacggc ggtggcacaccaggtaaacgtacacgagcacgccaacatcagcttcaagaaatatatgcc aatgcggctcatgaactgattgatagtgcggttcgtggcgaattggaagataaaatcgca gacaaggctgatttcaatgatcgactagtgctgtatttcatgcaaggagggcgtgatatc tatactggcacaccactgaatatcgatcaattaagtagttatgatatcgaccatattctg ccacagtcactgatcaaagataattctttggataatcgtgtgttagtgcatgccatcatc aaccgagaaaaaaacgcaacatttgcatcaaccatctatgcacaaaagatgaacgcgaca tggcgtcaatggcatgaggcagggctgattagcggtcgcaaactgcgtaatctgcaaatg cgtccagatcaaatcgataagtacgcgagcggttttgttgcccgacaattggtggaaact cgacaaattattaaactgacggaacaaattgtagcagcgcagtatcctgaaaccaaaatt atcgctgttaaagcaggactttcacatcaattgcgggaagaacttgaatttcctaagaat cgtgatgtgaatcactaccaccatgctttcgatgccttcctagccgcccggattggcact tatttactcaaacgatttcctaatttgcaggctttcttcacgtatggcaagtttaaaaaa gccgatgtcaaaaagcttcgcgggttcaactttatccgcgatatcacccatgctgaagat aaaattgtggtaaaggataccggcgaagttatttgggataagaagcgggatgttgacgaa ctggatcggatttacaacttcaagcggatgctgattacgcatgaggtgcactttgagaag gcggatttgtttaagcagacggtttatggggccaaagattcgaaagaggctggagggaag aaacagctcatttcgaagaaaaaaggatatccagttgatatttatggaggttatacgcaa gaaacgggtagttatctatctgttgttcgactaacaaaaaaagcgatgtatgctgtcgtg aaagtatcgacgagagatgctgctaaattggcagttgctaagagtatttctgagcaaaag gaaaacgagaccttaaatgatattattgatgaaaaactttcaaagataagcaaaaacgga aaaatcacgcatgagctattcgaggttgtcttaccacgggtggggcaaaaaaccttattt aaaaatagcaaatataatctatttctagtcaactcggatacctacatgcacaattaccaa gaactgtggatgccacgtgagtatcagaaaatgtggaaggatatttctctttctaaatac ggcgatgcccagacagaagaccagctagatcaaattttcgggtttattgtttctcaagta aacagttactttaatctgtatgatattaatcaatttcgtaaaaagttgaatgatgcggct gataagtttgctacacttccaatgcgcgatacagatgatatgcaaggaaaaattgcgaca ataggtcaactgttaattggccttcaagcaaatgctgcgagaagtgatttaaggaatctc gatataaaaacacctctaggattattgcaaattccaaacggaataagcctagactctgac acttcagttgtatatcaatccccaacaggtttgttggaacgagaagttcatttatctgat ctgtaa

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