Lacticaseibacillus paracasei LC2W: LC2W_2946
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Entry
LC2W_2946 CDS
T01956
Name
(GenBank) Integrase catalytic region
KO
K07482
transposase, IS30 family
Organism
lce
Lacticaseibacillus paracasei LC2W
Brite
KEGG Orthology (KO) [BR:
lce00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
LC2W_2946
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Gene cluster
GFIT
Motif
Pfam:
HTH_38
rve
HTH_32
HTH_23
Sigma70_r4_2
HTH_36
HTH_29
rve_3
GerE
LacI
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AEA55273
UniProt:
K0N275
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Position
complement(2863928..2864926)
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AA seq
332 aa
AA seq
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MSPYTHLTLKDRESILLGISTGKTLDTIAKEIGRSKSTVSREIARNGGWRSYSAATAQDR
YRRVRLASRRPRILDRPGTRDAVIRYITVLHWSPEQIAGRLSLEGSPIRISYSTIYRGIY
LDNLGVPLKSHGARGLPRLLRHRGKTRKIKGTINERRGRFNDVPSIHDRPRSAENRSWFG
HWEGDTVRGKTGHSALVTLVDRKSRYLLSKRTANAKADTVRDVMIELLGALPANRVRTVT
PDRGREFARYRELAERLNTKVFFPDPHAPQQRGTNENTNGLIREYFPKNTDLDLQSDQEI
ETYIEQLNNRPRKVLGWKTPSEVFMGKKLHLS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgtacacccatcttaccttaaaagaccgtgaatcgatactgcttggtatctct
acaggcaaaactcttgataccatcgccaaagagataggtcgttccaagagtacagtcagc
cgtgaaattgcacgtaacggcggctggcggagctattcggcagccaccgctcaggaccgc
taccggcgggttcgcttggctagcaggcgtcctcggatcctcgatcgaccggggactcgt
gacgctgtcattcgatatatcacggtgctacattggtcgcctgagcagattgccggtcgc
ttgtcactagaaggcagtcctattcgcatcagctattcgactatctacagaggtatctac
ctagataatctcggcgttccattgaagagccatggtgctcgcgggctaccaaggctgctt
cgacaccgaggcaagacgcgcaaaatcaaaggcaccataaatgaacgccgggggcgcttc
aatgacgtgccatcaattcacgaccgaccccggtcggcagaaaatcgcagctggtttggt
cactgggaaggcgatacagtacgcggtaaaacaggacactctgcattagtaacattagtt
gaccgtaaatcacgctatctgctttcgaagcgaacggccaacgcaaaagctgacactgtt
agagacgtcatgattgagctgcttggtgccttaccagctaaccgagtaagaacagtgact
cctgaccgtggaagggagtttgcccggtacagggagctggcagaacgcctgaatacaaag
gtcttctttcctgacccacacgcgcctcaacaacgaggaactaacgaaaacaccaacgga
ctgattagagaatactttcccaagaacacagacctagaccttcagagcgaccaggaaatt
gagacttacattgaacaactgaataatcgaccacgcaaggtcttaggctggaagacgcca
tcagaagtcttcatgggtaaaaagttgcacttgagttga
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