Lates calcarifer (barramundi perch): 108872389
Help
Entry
108872389 CDS
T04895
Name
(RefSeq) peroxisomal succinyl-coenzyme A thioesterase
KO
K01068
acyl-coenzyme A thioesterase 1/2/4 [EC:
3.1.2.2
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00062
Fatty acid elongation
lcf01040
Biosynthesis of unsaturated fatty acids
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
108872389
01040 Biosynthesis of unsaturated fatty acids
108872389
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lcf01004
]
108872389
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.2 Thioester hydrolases
3.1.2.2 palmitoyl-CoA hydrolase
108872389
Lipid biosynthesis proteins [BR:
lcf01004
]
Fatty acid synthase
Component type
108872389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAAT_C
Bile_Hydr_Trans
Peptidase_S9
DLH
Hydrolase_4
Abhydrolase_2
FrsA-like
PAF-AH_p_II
Motif
Other DBs
NCBI-GeneID:
108872389
NCBI-ProteinID:
XP_018515552
UniProt:
A0A4W6BRD1
LinkDB
All DBs
Position
LG10:693615..713032
Genome browser
AA seq
424 aa
AA seq
DB search
MDRKQCCVKLSVQPSRGLMDEKFIVLVQNVWPGFQLTVHALHQCEDGHSWEAFGHYTADA
TGTVNVSEDPSLGGTYSGVEPMGLLWSLRPVPGSKPGIRMRKMNVQTPMEVTISVYQGHQ
TEGFVDQVSLAGVLVERWYMAPGVHRIPITEGGLTATLFLPPGPGPFPGLLDLWGGTGDL
LEYRAALLASHGIASLALDYLTPKISMEAGKLVDNEYFETAYRVLQQHPQVLGSRIAMLG
LSFGCSVTLKMAAYSHVLKLRCAVCVNGSHVQPVDGSMTEIMHFFRENVGKVRFSEEKEV
IWRNLLLPIPTDPSLKVDVGRLQCPLLLVVGEDDQNWPAYESAMDMKEMMERAGNSHLLT
ILWYPNAGHLIEPPYTPLVRASTFKPAQSPETMMALWGGETVAHSRAQEDAWRKTLVFLR
ENLF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggacaggaagcagtgttgtgtgaagctgtcggttcagccatccagaggactcatggat
gagaagttcattgtcctggtccagaatgtctggcctggtttccagctgactgtccacgcc
ctccaccagtgtgaagacggacacagctgggaggcgtttggtcactacaccgctgacgcc
accgggactgtgaatgtttcagaggatcccagtctgggtggaacgtattctggggttgaa
ccgatgggtctactgtggagcctcagaccagttccaggcagcaaacctgggatcaggatg
aggaagatgaacgtccagactcccatggaggtcacaatctcagtgtaccagggtcaccag
actgaggggttcgtggatcaggtgtctctggccggtgtgttggtggagcgctggtacatg
gctcctggtgtccacagaatcccaatcacagagggcggactcactgcgaccctcttcctg
cccccaggacctggaccttttcctggactcctggatctgtgggggggtacaggggatttg
cttgagtaccgtgcagcgctgttggcctcccatggcattgcatccctggctcttgactat
ctgacaccaaaaatcagcatggaagctgggaagctggtggacaacgagtactttgagacg
gcctatagagtcctgcagcagcatcctcaggttcttggcagcaggatcgccatgttgggc
ctttcctttggctgcagtgtcaccctcaaaatggctgcatactcccatgttttaaagctc
aggtgtgcagtgtgtgttaatgggagtcatgtgcagccggtcgatggatctatgacagaa
attatgcatttctttcgtgaaaacgttgggaaagttcgattcagcgaggagaaggaggtg
atctggcgaaacctgctgctgcccatccccactgacccctccctcaaagtggacgtggga
cgactccagtgtcctctactgctggttgtaggtgaggacgatcagaactggcctgcctac
gagtctgcaatggacatgaaggagatgatggagcgagcaggaaacagccacctgctgacc
atcctgtggtaccccaacgccggtcacctgatcgaacctccgtacacgccgctcgtccga
gccagcaccttcaaaccagcccaatcacctgagaccatgatggctctgtggggtggagag
acggtggcacattctcgtgctcaggaggacgcctggaggaagacactggtctttctgagg
gagaatctgttctga
DBGET
integrated database retrieval system
