Lates calcarifer (barramundi perch): 108872401
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Entry
108872401 CDS
T04895
Name
(RefSeq) zinc finger and BTB domain-containing protein 38
KO
K10510
zinc finger and BTB domain-containing protein 38
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108872401
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108872401
04121 Ubiquitin system [BR:
lcf04121
]
108872401
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108872401
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
108872401
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108872401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-C2H2_4
zf-C2H2
zf-H2C2_2
zf-C2H2_3rep
zf-C2H2_6
zf-met
Spt46
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
108872401
NCBI-ProteinID:
XP_018515566
UniProt:
A0AAJ7PBB1
LinkDB
All DBs
Position
LG21:7634992..7647828
Genome browser
AA seq
1218 aa
AA seq
DB search
MTVVSPCTQNLMDSAHPHTVLSKLNEQRSQGLFCDVTIVVEDVKFRAHKNILAACSGYFR
NALTTPETWSSSQVLELMDLKSEVFASILNFIYCSKVTGAEDTVGLVAAGKRLGIPFLEK
LAEQEKQDECVKSTDSSAAPMSKKTKKEVLRPEEIDSARGPRITNAFSITEVCPGNNPFT
PLAETSGERQSPDVGPLPSSCPTTSCLNGNNETTHALSEHSYAVSKSTEGKDSSQSDNKK
VCKPAISQPKQLIYRNTGPLKKRHRLRGIVGRTMLPTPAEPQADKPNTITPTSADSVTAE
PVALMTPPPLFSEVETEKSVDQGPPTATDNVQMELGPPALSPHTEDSISIYGCEHCPEIF
TNKALLTVHSEVHKKRFVSHLFCKFCHRKFIHLKRLRNHEQVCPKAGREPPKLDDTGTPP
KETDLHSDDVPNTESNMTQLPSDDLSTPYSPEPLQVDQSELPHDEKAARPGGSQRRYNCS
VCKRVYVTLSSLKRHENVHSWQRAYPCHYCNKVFALAEYRTKHEIWHTGERRYQCIFCLE
TFMTYYILKNHQKSFHGIDPNLAVKKKSANGGLKASVYPIKLYRLLPMKFRKRQYKTYSQ
TYSESVERGDQAPLDSNSLIPPFEENGLISHSDTMSFPLTFMATTKTVAPVMPRISIDKP
CDQDVDQNLNSELEIQRRTRKEAENSDSPLINYNSTFSLQPSSGGYKDDPPVLMNSEYIS
NNVPFLNSLKTVKKLGELSASAKRVEDMTKEILQSSTDNLVRDKTVGAKTETYIAKPACP
GPSVDGDAMPLCQITVKIGNEAIIRRRIKGSKLFPRKKRRVRELSEEESPAQCPPMRESS
ESPRLRLRPEVTATTEPETYDDPNDCDTADMLWRPYYSYKAKKKRKRLRMKHRNALFHRY
AETSADKTAATEAHLDRNSWLTEENVSGGSAEVKRSLSRNCSPRANYNCDICDSSFITET
GLRAHVIGSHPCFCRTCGKQGPPGEAPAGGDYICNSCMENGSCFDNTPRSPNPEKKYRCS
FCPQRFLYLATKRSHEKKHQETNEEGYNYDNFAPCSKYLSEANKQDTIKTEDSDNQGSID
IKSETGEGGHFSIDKIKPKIEDTTDFMSLSAYQDMSYSNIKSPLSPCIDPLFSLTSPKVK
HKTVKKRISALHSMHLISKKQARDRGSDSNKDILMRPKTNSDREKSGKLFRKNDSETKGA
HISIHKPEKWVCKEEPFF
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgacagtggtgtccccatgcactcagaacctgatggatagcgctcaccctcacaccgtg
ctcagcaagctcaacgagcagcggtcacaaggcctcttctgtgatgttaccattgtggtg
gaggatgttaagtttcgggcccacaagaacatcctggcagcctgcagtgggtacttcagg
aacgctctgacaactcctgagacatggagctccagccaagtgctggagctgatggacctg
aagtcagaggtgttcgccagtatcctcaacttcatctactgttcaaaggtgactggcgca
gaagacacagtgggactagtcgcagctggaaaaagacttggaattccttttttagagaag
cttgcagaacaagagaaacaggatgaatgtgttaaatccacagactccagcgcagcccca
atgtctaaaaaaacaaagaaggaagtgctcaggcctgaggagatagacagtgccagaggg
ccacgcatcaccaacgccttctctatcactgaagtgtgtcctgggaacaatcccttcacc
cctctggctgaaaccagcggagagaggcagtcaccagatgtgggaccactcccatcaagt
tgccctacaacgtcctgcctcaatgggaacaatgagaccacccacgccctctcagagcac
tcatatgcagtgagcaaatccactgaaggcaaagatagcagtcagtcagacaacaagaag
gtctgtaagccagcaatatctcagccaaagcaacttatttacaggaacacaggcccgctt
aaaaagcgccacaggctaagaggcattgtgggtagaacaatgcttccaacaccagctgaa
ccacaagcagacaaaccaaatacaataacccccacatcagctgatagtgtaactgcagaa
cctgttgcactcatgacaccacctccacttttttcagaggtagaaacagaaaagagtgtt
gaccaagggccaccaacagccactgacaatgttcaaatggagttaggtccccctgccctt
tcccctcacacagaggacagtatctcaatctacggatgcgagcactgtccagagatattc
acaaataaagctcttctcaccgttcactcagaagtacataaaaagcgttttgtcagtcat
ttgttttgcaagttttgtcacagaaagttcatacacctcaaacggttgcgcaaccatgag
caggtttgtcctaaggctggaagagagccgcctaaactagatgatactggcacaccaccc
aaagagacagacctccattcagatgacgtgccgaacacggagagcaacatgacacagctt
ccttccgatgacctctccactccttactccccagagccgcttcaagtggaccaatcagag
cttccacatgatgagaaagcagcgaggccaggtggcagtcagaggagatacaactgcagt
gtgtgtaaacgggtctatgtcaccctatcaagtctgaagcggcatgagaatgtacattcc
tggcagagggcctatccctgtcattattgcaataaagtgtttgcattggcggagtaccgt
acaaagcatgaaatctggcacacaggtgaacgacgctatcaatgcattttctgcctggag
acattcatgacatactatatcttaaagaaccatcagaagtcctttcacggcatcgatccc
aatctagctgtaaagaaaaaatctgccaatggtgggctgaaagccagcgtttacccaatc
aagctctacaggcttctgcccatgaagtttagaaagagacagtacaaaacgtacagtcag
acatattcagagagtgttgagagaggtgaccaagctcctctagacagcaactctcttatc
cctccatttgaagaaaacggtctgatcagccactctgataccatgtcattccctctgaca
ttcatggcaacaacaaagaccgtggcccctgtcatgcctcgcatcagcattgacaagcca
tgtgaccaagatgttgaccaaaatctgaacagtgaattggaaattcagagacgcacaaga
aaagaggctgagaatagtgattcccccctcattaactacaacagcaccttctctttgcaa
cccagttcagggggttacaaagacgatcctccagtgcttatgaactcagagtacatcagt
aacaatgtgccattcttaaactctttgaaaactgtcaaaaagttaggtgagctttcagcc
tctgcaaaaagagttgaggacatgaccaaggagatactccaatcaagcacagataatcta
gtgcgtgataaaacagtgggggcaaagacggaaacgtatatcgccaaacctgcatgcccg
ggtccatctgtggatggtgatgccatgccactctgtcagataacagtgaaaataggcaat
gaagccatcatccgccgccgaatcaaaggatctaagctcttccccagaaagaaaaggaga
gtcagagagctaagtgaggaggaaagcccagctcaatgccctccaatgagggaaagctca
gagagccccaggctccgcctcagaccagaagtcactgccaccacagagcctgagacgtat
gatgatcccaatgactgtgacacagctgacatgctctggcgtccctactattcctataaa
gctaaaaagaagaggaagaggctgaggatgaagcacagaaatgctttgtttcaccgttat
gctgagacatctgcagataaaacagctgccactgaggcccaccttgacagaaatagttgg
ctgacagaagagaacgtctcaggtggtagtgcagaggtgaaacgtagtctgagcaggaac
tgcagcccaagggccaactacaactgtgacatctgtgacagctcttttatcacagagacc
ggtctgagggctcatgttattggttcacatccatgtttctgccggacctgtggtaaacaa
ggtccccctggtgaggcaccggctggtggtgattacatctgcaacagctgtatggaaaat
ggctcctgctttgacaatacaccccggagccccaacccggagaagaagtatcgctgctca
ttttgtccccagcgtttcctctaccttgccactaagagaagccatgagaaaaaacaccaa
gagacaaatgaggaggggtacaattatgacaactttgcaccatgttctaaatacctaagt
gaagccaataaacaagacaccatcaaaacagaagacagtgacaatcaaggcagcatcgac
attaaaagtgaaacaggggaaggaggacatttttccattgataaaattaaacctaaaatc
gaggacacaactgactttatgtctttgtcagcataccaggacatgtcatattccaacatt
aaaagtccattatcaccctgcattgacccactgttctccctgacatccccaaaggtaaaa
cacaaaacagtgaaaaaaaggatcagtgcactgcattctatgcatctcatctcaaaaaag
caagcccgtgacagaggcagcgatagcaacaaggatattttgatgaggccaaaaacaaac
agtgatcgtgagaagtccggtaaactgtttaggaaaaatgactctgagactaaaggggct
cacatttctatacacaagccagagaaatgggtctgcaaagaggagccatttttttag
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integrated database retrieval system
