Lates calcarifer (barramundi perch): 108872423
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Entry
108872423 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar and coiled-body phosphoprotein 1
KO
K25818
nucleolar and coiled-body phosphoprotein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108872423
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Others
108872423
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRP40_C
LisH
Motif
Other DBs
NCBI-GeneID:
108872423
NCBI-ProteinID:
XP_050932757
UniProt:
A0AAJ8DVN1
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Position
LG16_LG22:4844246..4850519
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AA seq
965 aa
AA seq
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MRRIPDSSFLSRRSVVKMAAQKSVPSDLFKCVYSFLLENKFTKAAEQFLKQTKVTPLDEK
EESLVNIYNFWVKSPEAKKRKAPNEADITNGPSAKKSKTTTESSSSEESSSEDEEAVAKP
TKAPAAAKVVPAKAAAAAATKAASSSSEDSSDSEEEEKAPAKAPTKAPVKPVASAPAAAG
STRKKDSSSSSEESDSEDEQPAKAPAPKPKAGAVTPSKPAVPAKGAVQKKQQSSSSEDSS
SDSEDEEPAKAPVKPTPVKAAAAAAAESSSEDSSSEDEAPPSKKPKAGAYSAVPPPASIQ
KAPAAPAASKAKDSDSSDSSDDSSDEEEEKKAAAKPAPVKTAAAKPGVAKPAAKKQESSS
ESSDSSSDEERQRNPAAKVTPAKAAPAKPVPAKAAPAKKEDSDSDSSSSEDEEEVKKPPA
KVTPAKAGPAKPVAAKATPAKEDSSEEDSSSEEETAAKKPPAKPAPAKTPPAKKDESSSS
DSDSSSEDEAPAKPATKTAAPAKPTASKAPAKKAESSSDSEDSSEDEEPVKSKPAAKPST
PASKAATPVAKPPAAAESSSDSDSSDEEEEPAKAKPTGTKPATPASKAATPAAKPAAAAE
SSSDSDSSSEDEEPVKAKSAAAKPATPASKPATPAAKPAAAAESSSDSDSDSSDSDNKAT
KPAVKKQAPAVAAAAKKPAAAAKDSSDSSDESSSDEEEEPKKAAPAPKPAATKAAAAPTK
KAEESSSDSSDSSDSETETKSIPAVTNGKAATPKTASAAAKAPAKPEESSSSDSSSEEEE
EASKSTKVPVKVQKPGTPAAAAKTTPAAKPKEXSSSSSSDSSSDEEEAPRKAATAPSTPA
TNGTNGKRKRDKESSESEEEETEVTTPKNKKATTTPQTFPKANKKSSNVPFRRIREDEVE
VDPRLMDNSFDAKHGATGDWGQKANEILKFTKGKSFRHEKTKKKRGSYRGGAISTTVNSI
KFDSD
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcgccggattccggactcctccttcctttccagaaggagcgtggtgaagatggcggcg
cagaagtcggtgccgagtgatcttttcaaatgcgtttattcatttctgctggagaacaag
ttcactaaggcggcggagcagtttctgaaacagacgaaagtgactccactagatgaaaag
gaggagagcctcgtcaacatctacaacttctgggtgaagtctcctgaggccaagaaacga
aaagcacctaatgaggcagacattaccaacggtccatcggccaagaaatcaaaaaccact
acagagagctccagcagcgaagagtcaagcagtgaggatgaagaagctgttgcaaaacca
actaaggcccctgcagcagccaaggtggtgcctgctaaagcagcagcagctgcagctact
aaagctgcatccagcagcagtgaagactccagtgactctgaggaggaggagaaggctcct
gcaaaggctcccacaaaggctcctgtgaagccagttgcttctgctcccgctgctgcaggc
agcacaaggaagaaagacagcagctccagcagtgaagaatctgactctgaggatgagcag
cccgctaaagcccctgcaccaaaacccaaggcaggtgcagtcacaccatccaaaccagct
gttcctgccaaaggagcagttcagaaaaagcagcagagtagcagtagtgaagacagttcc
tcagattctgaagatgaagaaccagctaaggctccagtcaaacccaccccagtaaaggct
gctgctgcagctgcagctgaatcaagtagtgaagattcttcatctgaagatgaggctcct
cccagcaaaaaaccaaaagcaggagcgtacagtgcagtcccaccacctgcttcaatccag
aaagccccagctgcaccggcagccagcaaggccaaggacagcgactcctcagacagcagt
gatgacagcagtgacgaggaagaagagaagaaagcagctgcgaaacctgcaccggtaaag
acagctgctgccaaacctggtgtggccaagcctgctgcaaagaagcaggaatccagctct
gagagttcagattcaagctcagatgaagagaggcaaagaaaccctgcagccaaagtcact
ccagctaaagcggccccagccaaacctgtcccggccaaggctgcacccgctaaaaaggaa
gactcagactctgattcatcaagttcagaggatgaagaggaggtgaagaaacctccagcg
aaggtgacccctgctaaggctggcccagctaaacctgttgcagctaaagccacaccagct
aaagaagactcctcagaggaggattccagttcagaggaggagacagcagcaaagaagccc
ccggctaaacctgcacccgccaagactcccccagctaaaaaagatgagtcctcaagctca
gattcagacagcagctctgaagatgaggctccagcaaaacctgccaccaaaactgcagct
ccagcaaaacctactgcttccaaagccccagccaagaaagcagagagcagctctgattca
gaggactcctccgaggatgaggaaccagtgaaatctaagccagcagccaaaccatccacc
cctgcttcaaaggctgctacccctgttgcaaagcctcctgcagcagctgagagcagctct
gactctgattcctctgatgaggaggaggaaccagctaaggccaagcccacaggaactaaa
cctgcaactccagcttcaaaggctgctactcctgcagctaaacctgctgctgcagcagag
agcagctcagactctgactcctcttctgaagatgaagaaccagtcaaggctaaatctgca
gcagctaaaccagctactccagcctcaaagccagctactcctgcagcaaagcctgctgca
gcagcagagagcagctcagactcagacagtgacagctcagactcagacaacaaggccacc
aaacctgcagtcaagaaacaagctccagcagtagcagctgctgccaagaaacctgccgcc
gctgctaaggattcttctgactccagtgatgaaagttccagtgacgaggaggaggaaccc
aagaaggcagcaccggcacccaagccagcagccacaaaggctgctgctgctccaacaaag
aaggctgaggagagcagctctgactcctccgatagctctgattctgaaaccgagaccaag
tccatccctgctgttaccaatggcaaagcagcaacacccaagacagccagtgcagcagcc
aaggccccagcaaaaccagaggagtcctcatccagtgacagtagctctgaggaggaggaa
gaggccagtaaaagtacaaaagtaccagtaaaagtacaaaaacctggtacacctgctgca
gcagcaaagacaactcctgcagctaaacctaaagagnagagcagcagcagctcctcagac
agttcatcagatgaggaggaagcaccgcgcaaagcagccacagcacccagcacccctgca
actaacggtaccaatggaaagagaaaaagagacaaagaatcatcagagagtgaagaggaa
gagacagaagtcacgacaccaaaaaacaagaaagcaacaacaacacctcagactttccct
aaagcaaataagaagtcttccaacgtccctttccgtagaataagggaggatgaagtagaa
gtggatccccgtcttatggacaactcttttgatgcaaagcatggagccacaggggattgg
gggcagaaagccaatgagatactcaagttcacgaaaggcaagtcattccgccacgaaaag
accaagaagaagaggggaagctaccgtggcggagccatctccaccacagtcaactccatt
aagtttgacagtgactga
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