Lates calcarifer (barramundi perch): 108872460
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Entry
108872460 CDS
T04895
Symbol
pax1b
Name
(RefSeq) paired box protein Pax-1 isoform X1
KO
K09382
paired box protein 1/9
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108872460 (pax1b)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108872460 (pax1b)
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GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_29
HTH_28
Motif
Other DBs
NCBI-GeneID:
108872460
NCBI-ProteinID:
XP_018515655
UniProt:
A0AAJ7PB80
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Position
LG7_1:2045674..2053280
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AA seq
347 aa
AA seq
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MEQSYGEVNQLGGVFVNGRPLPNPVRLRIVELAQLGMRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPAVVKSIRDYKQGDPGIFAWEIRDRLLTDGVCDKYNVPSV
SSISRILRNKIGTLSQPGQPDNDKPAPAPIQYGHVYPYSPYTGPHTGTRTGSGPAGHVGL
PRNWHNFLGIRAFMDPAALPGSNGHSAKAEDWTSMTSRPFPSGINTAEKINNDPDFKYPQ
QSGYVSACAYSAPNQYCTYGGPAASYTAHHWQPQSSSLTPSLAPSMAPSLAPSLAPSLAP
SLAPPGSAAPLESSDFHITTSFKLSQREETGDNLRWRRDEGRLAENV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggagcagagctacggggaggtgaaccagctcggcggggtgttcgttaacggccggccg
ctgccgaacccggtgcggctgcggatcgtggaactggcgcagctcgggatgcggccctgc
gacatcagccgccagctgcgggtctcccacggctgcgtgtccaagatcctggcccgctac
aacgagaccggctccatcctgcccggagccatcggcggcagcaagccccgggtcaccacc
ccggccgtggtcaagagcatccgggactacaagcagggggacccggggatcttcgcctgg
gagatccgggaccggctgctgacggacggggtctgcgataagtacaacgtgccgtcggtc
agctccatcagccgcatcctcaggaataagatcgggactctgtcgcagccgggtcagccc
gacaacgacaaacctgctccggctccgatccagtacggacacgtctacccgtactccccc
tacaccgggccccacaccgggaccaggaccgggagcgggcccgctgggcacgtgggcctg
ccgcggaactggcacaacttcctgggcatcagggctttcatggacccggcagctctgcct
ggatctaatggacactcggccaaagcggaggactggaccagtatgaccagtcgaccgttt
ccctctggaataaacacagcagagaaaatcaacaacgatccagacttcaaatacccacag
cagtctggttacgtctcagcttgtgcctattctgcaccaaaccagtactgtacgtacgga
ggcccggcggccagctacactgcacaccactggcagccacagtcctccagtctgaccccg
agtctagctccaagtatggccccgagtctggccccgagtctggccccgagtctggccccg
agtctggctcctcctggctctgcagcaccactggagtcttcagattttcacatcacgaca
tcgttcaaactttcacagagagaagaaactggagacaacctgagatggcgccgcgatgaa
ggaagattagctgaaaacgtttag
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